RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TCTN2Q96GX1 697 aa14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 KIAA1671Q9BY89 1806 aa14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 KCNK2O95069 426 aa14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 CXCR1P25024 350 aa14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 MOGQ16653 247 aa14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 C14orf28Q4W4Y0 310 aa14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 KLHL22Q53GT1 634 aa14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 BORAQ6PGQ7 559 aa14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 CENPSQ8N2Z9 138 aa14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 ZNF671Q8TAW3 534 aa14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 MND1Q9BWT6 205 aa14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 SIDT1Q9NXL6 827 aaKnown RBP14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 LRRK1Q38SD2 2015 aa14.73□□□□□ -0.05
SMARCD1-202ENST00000394963 CDC42EP2O14613 210 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 RAB36O95755 333 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 FOLR1P15328 257 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 HOXB9P17482 250 aaPredicted RBP14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 SOX18P35713 384 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 SLC35F3Q8IY50 421 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 UFD1Q92890 307 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 ZNF681Q96N22 645 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 GAREM1Q9H706 876 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 CBLCQ9ULV8 474 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 C19orf53Q9UNZ5 99 aaPredicted RBP14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 DNAJC13O75165 2243 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 GBF1Q92538 1859 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 MCIDASD6RGH6 385 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 PRICKLE3O43900 615 aaPredicted RBP14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 HEXBP07686 556 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 SOX2P48431 317 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 SYT14P1Q58G82 188 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 LANCL3Q6ZV70 420 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 USP43Q70EL4 1123 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 SLC29A4Q7RTT9 530 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 FCGR1BQ92637 280 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 ZNF304Q9HCX3 659 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 TAS2R7Q9NYW3 318 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 GNG8Q9UK08 70 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 TVP23AA6NH52 213 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 OXSR1O95747 527 aaPredicted RBP14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 ILKQ13418 452 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 MTFR2Q6P444 385 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 JAZF1Q86VZ6 243 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 HPS1Q92902 700 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 HHATLQ9HCP6 504 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 KLRF1Q9NZS2 232 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 CTSFQ9UBX1 484 aa14.72□□□□□ -0.05
SMARCD1-202ENST00000394963 SDC2P34741 201 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 PSMB10P40306 273 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 ETV5P41161 510 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 EIF2B2P49770 351 aaKnown RBP14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 ETV1P50549 477 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 CRMP1Q14194 572 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 TP53I3Q53FA7 332 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 FAM199XQ6PEV8 388 aaPredicted RBP14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 RPTNQ6XPR3 784 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 TMPRSS11AQ6ZMR5 421 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 KRT74Q7RTS7 529 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 GJD3Q8N144 294 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 LNX2Q8N448 690 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 SFXN5Q8TD22 340 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 CCDC74AQ96AQ1 378 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 TSSK2Q96PF2 358 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 HSPE1-MOB4S4R3N1 261 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 COL4A3Q01955 1670 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 PRAMEF2O60811 474 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 IDUAP35475 653 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 IL18Q14116 193 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 ZNF582Q96NG8 517 aaPredicted RBP14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 MESP1Q9BRJ9 268 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 NXF5Q9H1B4 397 aaKnown RBP14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 NECTIN3Q9NQS3 549 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 CES1P1Q9UKY3 287 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 POLR1DQ9Y2S0 133 aa14.71□□□□□ -0.05
SMARCD1-202ENST00000394963 A0A1W2PRQ8 180 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 ZAR1LA6NP61 321 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 SRPX2O60687 465 aaPredicted RBP14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 RCBTB2O95199 551 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 IFNGP01579 166 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 GRK5P34947 590 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 PROKR2Q8NFJ6 384 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 OR4C15Q8NGM1 316 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 SPRYD4Q8WW59 207 aaPredicted RBP14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 MR1Q95460 341 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 HS6ST2Q96MM7 605 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 NELL2Q99435 816 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 BTBD2Q9BX70 525 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 NANSQ9NR45 359 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 ANKRD10Q9NXR5 420 aa14.71□□□□□ -0.06
SMARCD1-202ENST00000394963 PTPRSQ13332 1948 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 AGAP5A6NIR3 686 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 TMEM229AB2RXF0 380 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 ARHGEF9O43307 516 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 GDF9O60383 454 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 HMGN1P05114 100 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 ZNF3P17036 446 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 DEFA1P59665 94 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 DEFA3P59666 94 aa14.7□□□□□ -0.06
SMARCD1-202ENST00000394963 SQSTM1Q13501 440 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms