RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RMND5AQ9H871 391 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 TPT1P8Q9HAU6 139 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 KCNJ16Q9NPI9 418 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 SLC52A3Q9NQ40 469 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 SLC25A37Q9NYZ2 338 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 PLA2G2EQ9NZK7 142 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 WDR45Q9Y484 360 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 PCDHB14Q9Y5E9 798 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 CSMD2Q7Z408 3487 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 NCOA6Q14686 2063 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 CENPEQ02224 2701 aa6.91□□□□□ -1.3
HMGB3P1-201ENST00000393368 A0A087WZY1 265 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 SLC22A20A6NK97 555 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 HSPB2A8KAH6 182 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 EEF1E1-BLOC1S5C9J1V9 151 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 H3BNH8 94 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 AP3D1O14617 1153 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 TNFSF11O14788 317 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF264O43296 627 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 EEF1E1O43324 174 aaKnown RBP6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 EFNA2O43921 213 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 ADAM11O75078 769 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 KRT75O95678 551 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 AGR2O95994 175 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 CSTAP01040 98 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 IL2RAP01589 272 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 BCHEP06276 602 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 HOXD4P09016 255 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 TMIGD3P0DMS9 266 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 NR2F1P10589 423 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZNF17P17021 662 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 MSX1P28360 303 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 UQCRC1P31930 480 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 RYKP34925 604 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 TIMP3P35625 211 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 EIF1AXP47813 144 aaKnown RBP6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 SLC6A8P48029 635 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 MRPL19P49406 292 aaKnown RBP6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 ATP4BP51164 291 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 P2RX1P51575 399 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 DLX5P56178 289 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 DSTNP60981 165 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 SIRPAP78324 504 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 LRRC74AQ0VAA2 488 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 FGFBP1Q14512 234 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 PON3Q15166 354 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 QPRTQ15274 297 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 HSPB2Q16082 182 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 MSANTD1Q6ZTZ1 278 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 P4HA3Q7Z4N8 544 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 MTERF4Q7Z6M4 381 aaKnown RBP6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 ADGRE4PQ86SQ3 457 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 MCEMP1Q8IX19 187 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 MEIOBQ8N635 442 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 FNDC9Q8TBE3 224 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 GPR119Q8TDV5 335 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 CNOT9Q92600 299 aaKnown RBP6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 ZBTB8AQ96BR9 441 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 DTNBP1Q96EV8 351 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 DNAJA3Q96EY1 480 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 CALHM2Q9HA72 323 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 CHST11Q9NPF2 352 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 VAPAQ9P0L0 249 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 CLEC4AQ9UMR7 237 aa6.9□□□□□ -1.3
HMGB3P1-201ENST00000393368 MYO7BQ6PIF6 2116 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 MED12Q93074 2177 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 DIDO1Q9BTC0 2240 aaKnown RBP6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 DCHS2Q6V1P9 2916 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 A0A096LPI6 279 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 A0A0J9YW62 118 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 C7orf72A4D263 438 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 CLIC1O00299 241 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 DVL2O14641 736 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 HNRNPRO43390 633 aaKnown RBP6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 CXCL13O43927 109 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 AQP8O94778 261 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 SOX30O94993 753 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 TFPTP0C1Z6 253 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZCCHC18P0CG32 403 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 TROVE2P10155 538 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 PRKCAP17252 672 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 KLK2P20151 261 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 CTSSP25774 331 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 PGM1P36871 562 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 CBFBQ13951 182 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 SELPLGQ14242 412 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 SF3B4Q15427 424 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 RGNQ15493 299 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 BCL2A1Q16548 175 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 SGCBQ16585 318 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 CTU2Q2VPK5 515 aaKnown RBP6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 GLYR1Q49A26 553 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 LRIF1Q5T3J3 769 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 VWA1Q6PCB0 445 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF836Q6ZNA1 936 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 LRRC74BQ6ZQY2 392 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 EIF3MQ7L2H7 374 aaKnown RBP6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 CHMP1BQ7LBR1 199 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 LUZP2Q86TE4 346 aa6.89□□□□□ -1.31
HMGB3P1-201ENST00000393368 RETREG3Q86VR2 466 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms