RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ARL14EPQ8N8R7 260 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 GLYATL2Q8WU03 294 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 THEM6Q8WUY1 208 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 ZNF707Q96C28 371 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 ECHDC3Q96DC8 303 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 CMSS1Q9BQ75 279 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 TINAGL1Q9GZM7 467 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 NOX3Q9HBY0 568 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 DUX4Q9UBX2 424 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 GPN3Q9UHW5 284 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 FXYD6-FXYD2A0A087WZ82 144 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 CREBL2O60519 120 aaPredicted RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 TBL1XO60907 577 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 CLDN7O95471 211 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 SNRPBP14678 240 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 ZNF626Q68DY1 528 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 CEACAM19Q7Z692 300 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 PUSL1Q8N0Z8 303 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 DMBX1Q8NFW5 382 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 OR6K3Q8NGY3 331 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 ZNF461Q8TAF7 563 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 SGK3Q96BR1 496 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 NARS2Q96I59 477 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 RBM14Q96PK6 669 aaKnown RBP13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 OR1F2PQ96R84 312 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 TIMP4Q99727 224 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 JAM3Q9BX67 310 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 FXYD6Q9H0Q3 95 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 CXorf36Q9H7Y0 433 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 OPN4Q9UHM6 478 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 ENTPD4Q9Y227 616 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 DTX4Q9Y2E6 619 aa13.66□□□□□ -0.22
VPS9D1-201ENST00000389386 A0A0G2JPF8 293 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 HNRNPCL3B7ZW38 293 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 M0R3H8 397 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 GPR31O00270 319 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 GNB5O14775 395 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 EIF1BO60739 113 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 EGFP01133 1207 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 HNRNPCL4P0DMR1 293 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 SPP1P10451 314 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 TBXA2RP21731 343 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 UQCRC2P22695 453 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 ATP6V1E1P36543 226 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 EIF1P41567 113 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 B4GALNT1Q00973 533 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 TNFRSF17Q02223 184 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 CLEC12AQ5QGZ9 265 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 ADGRF1Q5T601 910 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 BBS1Q8NFJ9 593 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 TCEAL4Q96EI5 215 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 NFKBIL1Q9UBC1 381 aaPredicted RBP13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 LHX3Q9UBR4 397 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 MBD1Q9UIS9 605 aaPredicted RBP13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 NPFFR2Q9Y5X5 522 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 SNRPGP15A8MWD9 76 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 J3QRE1 110 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 HOXA2O43364 376 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 KLHL18O94889 574 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 SERPIND1P05546 499 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 ANXA7P20073 488 aaKnown RBP13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 CDC73Q6P1J9 531 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 LRRN1Q6UXK5 716 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 BAIAP2L2Q6UXY1 529 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 IZUMO1Q8IYV9 350 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 RAB8BQ92930 207 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 ZNF251Q9BRH9 671 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 ZNF334Q9HCZ1 680 aaPredicted RBP13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 ANAPC1Q9H1A4 1944 aa13.65□□□□□ -0.22
VPS9D1-201ENST00000389386 DISC1C4P0D8 188 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 NRG2O14511 850 aaPredicted RBP13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 SLC16A5O15375 505 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 CLDN11O75508 207 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 CH25HO95992 272 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 SERPINA3P01011 423 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 IL5P05113 134 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 SAGP10523 405 aaPredicted RBP13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 ATF1P18846 271 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 MPGP29372 298 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 HTR1FP30939 366 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 CSNK1DP48730 415 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 FAM74A1Q5RGS3 127 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 FAM71E1Q6IPT2 247 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 COMMD6Q7Z4G1 85 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 TMEM150AQ86TG1 271 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 CBLN2Q8IUK8 224 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 APCDD1Q8J025 514 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 SLC44A3Q8N4M1 653 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 SIRT6Q8N6T7 355 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 ABHD4Q8TB40 342 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 C16orf78Q8WTQ4 265 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 TSNAXQ99598 290 aaKnown RBP13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 ORAI3Q9BRQ5 295 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 PLEKHA1Q9HB21 404 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 RASL12Q9NYN1 266 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 PLEKHM1Q9Y4G2 1056 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 SZT2Q5T011 3432 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 NAP1L6A6NFF2 107 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 ANHXE9PGG2 379 aa13.64□□□□□ -0.23
VPS9D1-201ENST00000389386 BNIP3LO60238 219 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms