RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 A0A075B6Q4 140 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 A0A0B4J2E0 115 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 A0A1B0GX12 115 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 ANKRD33BA6NCL7 494 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 SAGE2PA6NJ88 616 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 PFDN1O60925 122 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 PIAS2O75928 621 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 MED26O95402 600 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 CTSBP07858 339 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 CKMT1AP12532 417 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 IFI30P13284 250 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 PRG2P13727 222 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 CPEP16870 476 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 BMP7P18075 431 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 HTR1FP30939 366 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 GPR3P46089 330 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 FNTBP49356 437 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 PPM1FP49593 454 aaPredicted RBP9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 PPP5CP53041 499 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 CDH11P55287 796 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 COPZ1P61923 177 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 ZNF45Q02386 682 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 ITGADQ13349 1161 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 DSG2Q14126 1118 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 FGFBP1Q14512 234 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 WDR45BQ5MNZ6 344 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 AADACL4Q5VUY2 407 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 SLC30A6Q6NXT4 461 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 DCDC5Q6ZRR9 648 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 BCDIN3DQ7Z5W3 292 aaKnown RBP9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 ZNF440Q8IYI8 595 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 DEFB119Q8N690 84 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 LSMEM1Q8N8F7 131 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 PSD4Q8NDX1 1056 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 DNASE2BQ8WZ79 361 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 TGM7Q96PF1 710 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 OR1F2PQ96R84 312 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 IER2Q9BTL4 223 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 CENPOQ9BU64 300 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 OR52D1Q9H346 318 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 SIDT1Q9NXL6 827 aaKnown RBP9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 CRNNQ9UBG3 495 aaPredicted RBP9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 KLHL3Q9UH77 587 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 CLEC2DQ9UHP7 191 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 SSR3Q9UNL2 185 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 EXOGQ9Y2C4 368 aaKnown RBP9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 SCN2AQ99250 2005 aa9.68□□□□□ -0.86
POLR2J3-201ENST00000379340 NPIPA5A0A0B4J1W7 369 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 PNMA8CA0A1B0GUJ8 204 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 SYNDIG1LA6NDD5 238 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 NPIPA7E9PJI5 369 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 NPIPB9F8W1W9 429 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 TGFBR3LH3BV60 316 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 DSCR3O14972 297 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 NUDT21O43809 227 aaKnown RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 HCN1O60741 890 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 HBQ1P09105 142 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 GKN3PP0CG01 181 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 NPIPA8P0DM63 369 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 MAOBP27338 520 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 TGFBR1P36897 503 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 GCGRP47871 477 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 ATP12AP54707 1039 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 GFERP55789 205 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 BNC1Q01954 994 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 ZNF267Q14586 743 aaPredicted RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 DEFB133Q30KQ1 61 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 CLEC12AQ5QGZ9 265 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 PDZK1Q5T2W1 519 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 YOD1Q5VVQ6 348 aaPredicted RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 PRR23CQ6ZRP0 262 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 OR51Q1Q8NH59 317 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 DOK4Q8TEW6 326 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 AHCYL2Q96HN2 611 aaKnown RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 CCNL2Q96S94 520 aaPredicted RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 CDADC1Q9BWV3 514 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 RBCK1Q9BYM8 510 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 HOXD1Q9GZZ0 328 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 OR10A5Q9H207 317 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 UBQLN3Q9H347 655 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 ERVMER34-1Q9H9K5 563 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 DNAJB12Q9NXW2 375 aaKnown RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 CLDN16Q9Y5I7 305 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 SETXQ7Z333 2677 aaKnown RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 IGHV5-51A0A0C4DH38 117 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 ISPDA4D126 451 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 HTR3EA5X5Y0 456 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 EFCAB7A8K855 629 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 TMEM150CB9EJG8 249 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 ZNF670-ZNF695F2Z2N8 137 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 CDC42EP2O14613 210 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 DYRK3O43781 588 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 DUX1O43812 170 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 GPX5O75715 221 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 IGHA1P01876 353 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 TSPAN19P0C672 248 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 OCM2P0CE71 109 aa9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 OCMP0CE72 109 aaPredicted RBP9.67□□□□□ -0.86
POLR2J3-201ENST00000379340 CD1CP29017 333 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms