RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 C1QTNF3Q9BXJ4 246 aa17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 ATXN7L1Q9ULK2 861 aaPredicted RBP17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 hCG_1807616A0A1W2PRN6 198 aa17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 TSPAN31Q12999 210 aa17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 LEXMQ3ZCV2 418 aa17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 HES5Q5TA89 166 aa17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 HYLS1Q96M11 299 aa17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 HDAC8Q9BY41 377 aa17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 ZNF442Q9H7R0 627 aa17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 CD93Q9NPY3 652 aa17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 MEPEQ9NQ76 525 aaPredicted RBP17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 INPP5EQ9NRR6 644 aa17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 MRPL15Q9P015 296 aaKnown RBP17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 PSORS1C1Q9UIG5 152 aa17.54■□□□□ 0.4
CNTNAP3B-203ENST00000377561 RBMS1P29558 406 aaKnown RBP17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 EXOSC7Q15024 291 aaKnown RBP17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 RHOXF1Q8NHV9 184 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 FTCDNL1E5RQL4 147 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 CCNJQ5T5M9 372 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 SFRP4Q6FHJ7 346 aaPredicted RBP17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 SDR9C7Q8NEX9 313 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 FAM46BQ96A09 425 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 DDIT4LQ96D03 193 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 IL1AP01583 271 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 FASLGP48023 281 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 ZNF740Q8NDX6 193 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 ERVK-19Q9WJR5 959 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 ZNF175Q9Y473 711 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 TTLL8A6PVC2 850 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 F5H0A9 414 aaPredicted RBP17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 UBL4AP11441 157 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 IRF2P14316 349 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 MEPCEQ7L2J0 689 aaKnown RBP17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 ALDH3B2P48448 385 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 OR1Q1Q15612 314 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 HENMT1Q5T8I9 393 aaKnown RBP17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 BOLLQ8N9W6 283 aaKnown RBP17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 CXorf36Q9H7Y0 433 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 C2orf42Q9NWW7 574 aa17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 TEX10Q9NXF1 929 aaPredicted RBP17.53■□□□□ 0.4
CNTNAP3B-203ENST00000377561 ACPPP15309 386 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 TUBG1P23258 451 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 NR4A2P43354 598 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 HTRA3P83110 453 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 CHRNEQ04844 493 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 TMEM205Q6UW68 189 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 LIX1LQ8IVB5 337 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 NEURL3Q96EH8 262 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 TMEM38AQ9H6F2 299 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 HIF3AQ9Y2N7 669 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 SLC9B1P1A6NJY1 282 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 TOXO94900 526 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 NPPBP16860 134 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 MSX1P28360 303 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 ACTBP60709 375 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 ACTG1P63261 375 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 ADARB1P78563 741 aaKnown RBP17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 USF2Q15853 346 aaPredicted RBP17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 IL17RCQ8NAC3 791 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 C7orf34Q96L11 122 aa17.52■□□□□ 0.4
CNTNAP3B-203ENST00000377561 BLACEA4D250 179 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 FAM171A2A8MVW0 826 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 PVRP15151 417 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 NPR2P20594 1047 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 UBE2NP61088 152 aaKnown RBP17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 NKX3-2P78367 333 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 FAM205BPQ63HN1 556 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 LYSMD1Q96S90 227 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 MRI1Q9BV20 369 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 PCDHGA6Q9Y5G7 932 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 IFNGR1P15260 489 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 SF3A2Q15428 464 aaKnown RBP17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 TMEM52BQ4KMG9 183 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 BCL2L15Q5TBC7 163 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 GARNL3Q5VVW2 1013 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 PARP16Q8N5Y8 322 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 COQ8AQ8NI60 647 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 BABAM2Q9NXR7 383 aa17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 TESQ9UGI8 421 aaKnown RBP17.52■□□□□ 0.39
CNTNAP3B-203ENST00000377561 MEGF11A6BM72 1044 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 ACOT7O00154 380 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 HBQ1P09105 142 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 XCR1P46094 333 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 ACSM3Q53FZ2 586 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 LILRA3Q8N6C8 439 aaPredicted RBP17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 LMF2Q9BU23 707 aaKnown RBP17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 A4GALTQ9NPC4 353 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 STRCP1A6NGW2 1772 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 GGT3PA6NGU5 568 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 TRIM64BA6NI03 449 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 SCGB2A1O75556 95 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 PDE7AQ13946 482 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 COX20Q5RI15 118 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 TM9SF4Q92544 642 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 TM4SF18Q96CE8 201 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 TOE1Q96GM8 510 aaKnown RBP17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 C16orf58Q96GQ5 468 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 OR2S2Q9NQN1 319 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 POT1Q9NUX5 634 aa17.51■□□□□ 0.39
CNTNAP3B-203ENST00000377561 OTX2P32243 289 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms