RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 CGREF1Q99674 301 aa13.95□□□□□ -0.18
APOA1-205ENST00000375329 TRBV5-3A0A0A0MS03 114 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 C19orf84I3L1E1 186 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 FXYD1O00168 92 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 CTSSP25774 331 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 STARP49675 285 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 ZNF41P51814 821 aaPredicted RBP13.94□□□□□ -0.18
APOA1-205ENST00000375329 ATP12AP54707 1039 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 CLDN18P56856 261 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 TFF3Q07654 80 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 FLYWCH1Q4VC44 716 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 CCNJQ5T5M9 372 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 SEM1Q6ZVN7 128 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 ACBD4Q8NC06 268 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 RBM15BQ8NDT2 890 aaKnown RBP13.94□□□□□ -0.18
APOA1-205ENST00000375329 TNIP2Q8NFZ5 429 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 MIPOL1Q8TD10 442 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 ZFP90Q8TF47 636 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 OIT3Q8WWZ8 545 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 ROPN1LQ96C74 230 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 OTUB1Q96FW1 271 aaPredicted RBP13.94□□□□□ -0.18
APOA1-205ENST00000375329 TUBA1CQ9BQE3 449 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 FOXD3Q9UJU5 478 aaPredicted RBP13.94□□□□□ -0.18
APOA1-205ENST00000375329 AP4B1Q9Y6B7 739 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 APCP25054 2843 aa13.94□□□□□ -0.18
APOA1-205ENST00000375329 OR2M5A3KFT3 312 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 CLCA1A8K7I4 914 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 CLIC1O00299 241 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 STX11O75558 287 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 ZNF17P17021 662 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 BMP5P22003 454 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 TCEA1P23193 301 aaKnown RBP13.93□□□□□ -0.18
APOA1-205ENST00000375329 EIF1P41567 113 aaKnown RBP13.93□□□□□ -0.18
APOA1-205ENST00000375329 ASCL1P50553 236 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 MTPNP58546 118 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 B3GALT5-AS1P59052 145 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 RPS3AP61247 264 aaKnown RBP13.93□□□□□ -0.18
APOA1-205ENST00000375329 RPS26P62854 115 aaKnown RBP13.93□□□□□ -0.18
APOA1-205ENST00000375329 SELPLGQ14242 412 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 RUNDC3AQ59EK9 446 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 SAXO2Q658L1 398 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 OR2A2Q6IF42 318 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 NANOGP8Q6NSW7 305 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 HACD2Q6Y1H2 254 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 C16orf62Q7Z3J2 963 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 ADGRE4PQ86SQ3 457 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 GRAMD2AQ8IUY3 354 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 CHDHQ8NE62 594 aaPredicted RBP13.93□□□□□ -0.18
APOA1-205ENST00000375329 B4GALNT2Q8NHY0 566 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 PHOSPHO1Q8TCT1 267 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 ZBTB8AQ96BR9 441 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 NEURL3Q96EH8 262 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 C14orf79Q96F83 325 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 ANKRD27Q96NW4 1050 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 SDF2Q99470 211 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 TREX2Q9BQ50 279 aaPredicted RBP13.93□□□□□ -0.18
APOA1-205ENST00000375329 CPPED1Q9BRF8 314 aaPredicted RBP13.93□□□□□ -0.18
APOA1-205ENST00000375329 RTN4RQ9BZR6 473 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 NANOGQ9H9S0 305 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 TPT1P8Q9HAU6 139 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 FBXO34Q9NWN3 711 aa13.93□□□□□ -0.18
APOA1-205ENST00000375329 C7orf72A4D263 438 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 GTPBP1O00178 669 aaKnown RBP13.92□□□□□ -0.18
APOA1-205ENST00000375329 HCRTR2O43614 444 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 RCBTB2O95199 551 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 KRT75O95678 551 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 NPPAP01160 153 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 GUSBP08236 651 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 TMIGD3P0DMS9 266 aaPredicted RBP13.92□□□□□ -0.18
APOA1-205ENST00000375329 IGFBP2P18065 325 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 KHKP50053 298 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 SUMO3P55854 103 aaPredicted RBP13.92□□□□□ -0.18
APOA1-205ENST00000375329 PSME3P61289 254 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 ZSCAN26Q16670 478 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 ARHGAP11BQ3KRB8 267 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 KLHL26Q53HC5 615 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 RABL3Q5HYI8 236 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 COX20Q5RI15 118 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.92□□□□□ -0.18
APOA1-205ENST00000375329 C16orf89Q6UX73 402 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 P4HA3Q7Z4N8 544 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 ZAR1Q86SH2 424 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 RNF130Q86XS8 419 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 LIX1LQ8IVB5 337 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 DMRTC2Q8IXT2 367 aaPredicted RBP13.92□□□□□ -0.18
APOA1-205ENST00000375329 DEFB107AQ8IZN7 70 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 GTPBP8Q8N3Z3 284 aaPredicted RBP13.92□□□□□ -0.18
APOA1-205ENST00000375329 GATSQ8NAP1 163 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 OR5D16Q8NGK9 328 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 SLC7A6OSQ96CW6 309 aaPredicted RBP13.92□□□□□ -0.18
APOA1-205ENST00000375329 THUMPD3Q9BV44 507 aaKnown RBP13.92□□□□□ -0.18
APOA1-205ENST00000375329 SFXN3Q9BWM7 321 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 IKZF5Q9H5V7 419 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 POLE3Q9NRF9 147 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 PAQR5Q9NXK6 330 aaPredicted RBP13.92□□□□□ -0.18
APOA1-205ENST00000375329 VDAC3Q9Y277 283 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 ZNF337Q9Y3M9 751 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 DTNAQ9Y4J8 743 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 MPDZO75970 2070 aa13.92□□□□□ -0.18
APOA1-205ENST00000375329 ERICH4A6NGS2 130 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms