RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 OCEL1Q9H607 264 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 GPATCH2Q9NW75 528 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 NSG1A0A0A6YYJ2 146 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 ZIC2O95409 532 aaPredicted RBP13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 FAM57BQ71RH2 274 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 TMEM135Q86UB9 458 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 TUBA1CQ9BQE3 449 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 ALDOBP05062 364 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 OR8B8Q15620 311 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 MANEALQ5VSG8 457 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 FAM83FQ8NEG4 500 aaPredicted RBP13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 ZNF71Q9NQZ8 489 aaPredicted RBP13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 TBCCD1Q9NVR7 557 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 DRD1P21728 446 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 DNAJB1P25685 340 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 TMBIM6P55061 237 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 MS4A2Q01362 244 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 TCTE1Q5JU00 501 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 KDELC1Q6UW63 502 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 OR2A12Q8NGT7 310 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 PCDHGA7Q9Y5G6 932 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 GABRR3A8MPY1 467 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 SLC16A7O60669 478 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 TSPAN15O95858 294 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 RAB3AP20336 220 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 SCGB2A2Q13296 93 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 TMEM239Q8WW34 195 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 TP53TG5Q9Y2B4 290 aa13.82□□□□□ -0.2
NOTCH4-201ENST00000375023 XRN1Q8IZH2 1706 aaKnown RBP13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 A0A0G2JMP0 313 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 OXSR1O95747 527 aaPredicted RBP13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 IFNA1P01562 189 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 HMGN2P05204 90 aaKnown RBP13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 PABPC4LP0CB38 370 aaKnown RBP13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 CSNK1A1P48729 337 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 UNQ6126/PRO20091Q6UXV3 157 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 FAM160A2Q8N612 972 aaPredicted RBP13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 OR4M2Q8NGB6 313 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 OR5M1Q8NGP8 315 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 SLC12A9Q9BXP2 914 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 ENKD1Q9H0I2 346 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 C10orf71Q711Q0 1435 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 G3V2L1 256 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 NUPL2O15504 423 aaKnown RBP13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 ADAM12O43184 909 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 OSMP13725 252 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 MSR1P21757 451 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 HTR2AP28223 471 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 BDKRB2P30411 391 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 RAB33AQ14088 237 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 CNIH2Q6PI25 160 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 UNC5DQ6UXZ4 953 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 FAM43BQ6ZT52 329 aaPredicted RBP13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 ZNF440Q8IYI8 595 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 OR4K15Q8NH41 348 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 CASD1Q96PB1 797 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 SLC46A2Q9BY10 475 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 TEX10Q9NXF1 929 aaPredicted RBP13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 AGTR1P30556 359 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 WDR5P61964 334 aaKnown RBP13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 RFLNAQ6ZTI6 216 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 RABEPKQ7Z6M1 372 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 OR8J2Q8NGG1 315 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 RPS18P62269 152 aaKnown RBP13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 SFRP5Q5T4F7 317 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 PNCKQ6P2M8 343 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 DTWD1Q8N5C7 304 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 WWTR1Q9GZV5 400 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 EGLN3Q9H6Z9 239 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 OR6C2Q9NZP2 312 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 IL1AP01583 271 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 ACY1Q03154 408 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 FGL1Q08830 312 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 COX15Q7KZN9 410 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 MINDY1Q8N5J2 469 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 TRIB3Q96RU7 358 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 DUSP13Q9UII6 198 aa13.81□□□□□ -0.2
NOTCH4-201ENST00000375023 ABCC6O95255 1503 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 IGHV3-64DA0A0J9YX35 117 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 PRAMEF26H0Y7S4 382 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 SLC22A5O76082 557 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 ACPPP15309 386 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 ARSBP15848 533 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 CXADRP78310 365 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 TDGQ13569 410 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 SF3A2Q15428 464 aaKnown RBP13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 CDONQ4KMG0 1287 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 EXOSC6Q5RKV6 272 aaKnown RBP13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 DCP2Q8IU60 420 aaKnown RBP13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 ASCC1Q8N9N2 400 aaKnown RBP13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 CHDHQ8NE62 594 aaPredicted RBP13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 CALHM2Q9HA72 323 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 OLAHQ9NV23 265 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 CPNE7Q9UBL6 633 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 ZNF142P52746 1687 aaPredicted RBP13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 STK17BO94768 372 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 NDUFB2O95178 105 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 CYBAP13498 195 aa13.8□□□□□ -0.2
NOTCH4-201ENST00000375023 ENTPD8Q5MY95 495 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms