RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 M0QX08 132 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 RAB27BO00194 218 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 SOCS2O14508 198 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 ZNF749O43361 778 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 GCM2O75603 506 aaPredicted RBP8.09□□□□□ -1.11
TPM3-213ENST00000368545 SERPINB7O75635 380 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 SOX30O94993 753 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 PGM3O95394 542 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 MED26O95402 600 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 GASTP01350 101 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 RPLP0P05388 317 aaKnown RBP8.09□□□□□ -1.11
TPM3-213ENST00000368545 OR12D1P0DN82 309 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 NR2F1P10589 423 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 ITGA2P17301 1181 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 CD82P27701 267 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 HSD17B7P56937 341 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 KCNJ10P78508 379 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 EIF3IQ13347 325 aaKnown RBP8.09□□□□□ -1.11
TPM3-213ENST00000368545 MED21Q13503 144 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 KCNAB1Q14722 419 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 NRF1Q16656 503 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 IFI44LQ53G44 452 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 ATAD3BQ5T9A4 648 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 CDC73Q6P1J9 531 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 ZCCHC12Q6PEW1 402 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 MED25Q71SY5 747 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 VTCN1Q7Z7D3 282 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 GALNT10Q86SR1 603 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 KRT73Q86Y46 540 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 GALNT4Q8N4A0 578 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 CBR4Q8N4T8 237 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 IL17RDQ8NFM7 739 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 OR7G2Q8NG99 324 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 XAGE5Q8WWM1 108 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 KAT2AQ92830 837 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 TMBIM1Q969X1 311 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 ANKRD9Q96BM1 317 aaPredicted RBP8.09□□□□□ -1.11
TPM3-213ENST00000368545 TAMM41Q96BW9 452 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 GIMAP5Q96F15 307 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 OR1F2PQ96R84 312 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 PELOQ9BRX2 385 aaKnown RBP8.09□□□□□ -1.11
TPM3-213ENST00000368545 NDC1Q9BTX1 674 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 SPATA5L1Q9BVQ7 753 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 OSBPL10Q9BXB5 764 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 SPRTNQ9H040 489 aaPredicted RBP8.09□□□□□ -1.11
TPM3-213ENST00000368545 BCL2L10Q9HD36 194 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 ASCL3Q9NQ33 180 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 EXD2Q9NVH0 621 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 HCN3Q9P1Z3 774 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 SLC23A1Q9UHI7 598 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 C19orf53Q9UNZ5 99 aaPredicted RBP8.09□□□□□ -1.11
TPM3-213ENST00000368545 MYO15AQ9UKN7 3530 aa8.09□□□□□ -1.11
TPM3-213ENST00000368545 CCDC88CQ9P219 2028 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 A8MU76 341 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 DSCR3O14972 297 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 ACOX3O15254 700 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 DENRO43583 198 aaKnown RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 DNPH1O43598 174 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 OR10H2O60403 315 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 DOK2O60496 412 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 CTNSO60931 367 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 COQ9O75208 318 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 HPRP00739 348 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 SPTBP11277 2137 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 ETS2P15036 469 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 FOLR1P15328 257 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 NT5EP21589 574 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 ARHGDIAP52565 204 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 CCL7P80098 99 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 IGLV3-21P80748 117 aaPredicted RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 HPCAP84074 193 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 VLDLRP98155 873 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 INSM1Q01101 510 aaPredicted RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 STX4Q12846 297 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 SERTAD2Q14140 314 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 PRICKLE4Q2TBC4 344 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 OR2T5Q6IEZ7 315 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 MFSD12Q6NUT3 480 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 HIPK1Q86Z02 1210 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 CCDC28AQ8IWP9 274 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 OR4N5Q8IXE1 308 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 ST13P4Q8IZP2 240 aaPredicted RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 OR5D16Q8NGK9 328 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 OR2T29Q8NH02 315 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 OR1L3Q8NH93 324 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 OR5K1Q8NHB7 308 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 SPPL2AQ8TCT8 520 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 RAB8BQ92930 207 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 ZNF501Q96CX3 271 aaPredicted RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 RDH12Q96NR8 316 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 OR7D2Q96RA2 312 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 NR1H4Q96RI1 486 aaPredicted RBP8.08□□□□□ -1.12
TPM3-213ENST00000368545 ZNF347Q96SE7 839 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 NTN4Q9HB63 628 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 PRTFDC1Q9NRG1 225 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 AP4B1Q9Y6B7 739 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 A0A0G2JPF8 293 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 A0A1B0GX78 115 aa8.08□□□□□ -1.12
TPM3-213ENST00000368545 A0A1W2PQM1 296 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms