RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 FOXS1O43638 330 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 AKAP8O43823 692 aaKnown RBP12.96□□□□□ -0.33
USF1-202ENST00000368020 GAAP10253 952 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 PAICSP22234 425 aaKnown RBP12.96□□□□□ -0.33
USF1-202ENST00000368020 CSNK1EP49674 416 aaKnown RBP12.96□□□□□ -0.33
USF1-202ENST00000368020 EMDP50402 254 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 GAS1P54826 345 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 PSG6Q00889 435 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 BDH1Q02338 343 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 GRM7Q14831 915 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 OGFOD3Q6PK18 319 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 BCDIN3DQ7Z5W3 292 aaKnown RBP12.96□□□□□ -0.33
USF1-202ENST00000368020 ZNF440Q8IYI8 595 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 LNX2Q8N448 690 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 KLHL36Q8N4N3 616 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 OR4Q3Q8NH05 313 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 MVB12AQ96EY5 273 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 LOXL4Q96JB6 756 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 CEP19Q96LK0 163 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 VSTM2LQ96N03 204 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 PRRX2Q99811 253 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 MED18Q9BUE0 208 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 UBQLN3Q9H347 655 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 INPP5EQ9NRR6 644 aa12.96□□□□□ -0.33
USF1-202ENST00000368020 A0A0B4J2E0 115 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 CENPVL1A0A0U1RR11 272 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 IQCMA0A1B0GVH7 501 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 A0A1B0GX12 115 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 GXYLT2A0PJZ3 443 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 FUOMA2VDF0 154 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 MAGEB3O15480 346 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 DYRK3O43781 588 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 PIP5K1CO60331 668 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 IGHA1P01876 353 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 HNRNPCP07910 306 aaKnown RBP eCLIP12.96□□□□□ -0.34
USF1-202ENST00000368020 IFI30P13284 250 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 GALP22466 123 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 GABRA5P31644 462 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 SLC1A3P43003 542 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 BCAP31P51572 246 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 RPS3AP61247 264 aaKnown RBP12.96□□□□□ -0.34
USF1-202ENST00000368020 FUT7Q11130 342 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 LIPKQ5VXJ0 399 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 ZC3H14Q6PJT7 736 aaKnown RBP12.96□□□□□ -0.34
USF1-202ENST00000368020 MED25Q71SY5 747 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 CXXC5Q7LFL8 322 aaKnown RBP12.96□□□□□ -0.34
USF1-202ENST00000368020 BTLAQ7Z6A9 289 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 OR7G1Q8NGA0 311 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 CEP76Q8TAP6 659 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 BPIFA2Q96DR5 249 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 PEX11GQ96HA9 241 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 SAMD8Q96LT4 415 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 CCNL2Q96S94 520 aaPredicted RBP12.96□□□□□ -0.34
USF1-202ENST00000368020 ARHGAP9Q9BRR9 750 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 CCDC32Q9BV29 185 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 CNPPD1Q9BV87 410 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 IRAK4Q9NWZ3 460 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 SOHLH2Q9NX45 425 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 RHBDL2Q9NX52 303 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 HCN3Q9P1Z3 774 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 KCNE5Q9UJ90 142 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 NTNG1Q9Y2I2 539 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 GPR52Q9Y2T5 361 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 MMACHCQ9Y4U1 282 aa12.96□□□□□ -0.34
USF1-202ENST00000368020 SPIN1Q9Y657 262 aaPredicted RBP12.96□□□□□ -0.34
USF1-202ENST00000368020 MN1Q10571 1320 aaPredicted RBP12.95□□□□□ -0.34
USF1-202ENST00000368020 GPR179Q6PRD1 2367 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 SYNDIG1LA6NDD5 238 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 EFCAB7A8K855 629 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 CDC42EP2O14613 210 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 LYPD3O95274 346 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 ATP6V1E1P36543 226 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 GPR3P46089 330 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 GABRA4P48169 554 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 DEFA1P59665 94 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 DEFA3P59666 94 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 FGFBP1Q14512 234 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.95□□□□□ -0.34
USF1-202ENST00000368020 C14orf28Q4W4Y0 310 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 PDZK1Q5T2W1 519 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 SMARCD3Q6STE5 483 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 TMPRSS11AQ6ZMR5 421 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 AP3S1Q92572 193 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 KCTD7Q96MP8 289 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 HOXD1Q9GZZ0 328 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 CPNE5Q9HCH3 593 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 CMC2Q9NRP2 79 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 TNFRSF10DQ9UBN6 386 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 RPS6KB2Q9UBS0 482 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 GMEB2Q9UKD1 530 aa12.95□□□□□ -0.34
USF1-202ENST00000368020 SLC22A31A6NKX4 558 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 RIIAD1A6NNX1 92 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 RHPN2P1A8MT19 583 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 BHLHE40O14503 412 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 HCRTR1O43613 425 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 PRG2P13727 222 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 FGF9P31371 208 aaPredicted RBP12.94□□□□□ -0.34
USF1-202ENST00000368020 RANBP1P43487 201 aa12.94□□□□□ -0.34
USF1-202ENST00000368020 PPM1FP49593 454 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms