RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 RBMS1P29558 406 aaKnown RBP10.72□□□□□ -0.69
USF1-201ENST00000368019 SLC6A1P30531 599 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 IFNA8P32881 189 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 BSGP35613 385 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 FEN1P39748 380 aaKnown RBP10.72□□□□□ -0.69
USF1-201ENST00000368019 STAT5AP42229 794 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 PREPP48147 710 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 RFX3P48380 749 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 RNF144AP50876 292 aaPredicted RBP10.72□□□□□ -0.69
USF1-201ENST00000368019 DUSP3P51452 185 aaPredicted RBP10.72□□□□□ -0.69
USF1-201ENST00000368019 MAPK12P53778 367 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 EPHA4P54764 986 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 HNRNPKP61978 463 aaKnown RBP eCLIP10.72□□□□□ -0.69
USF1-201ENST00000368019 HOXC5Q00444 222 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 REEP5Q00765 189 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 RPA4Q13156 261 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 TRAM2Q15035 370 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 BTBD16Q32M84 506 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 CYP27C1Q4G0S4 372 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 RPS26P11Q5JNZ5 115 aaPredicted RBP10.72□□□□□ -0.69
USF1-201ENST00000368019 LAMTOR1Q6IAA8 161 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 ACSM5Q6NUN0 579 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 IGF2-ASQ6U949 168 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 TMEM107Q6UX40 140 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 IDO2Q6ZQW0 420 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 ZNF248Q8NDW4 579 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 ANKK1Q8NFD2 765 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 OR4D11Q8NGI4 311 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 ASB12Q8WXK4 309 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 HGDQ93099 445 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 RAD51AP1Q96B01 352 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 RADILQ96JH8 1075 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 OR2M2Q96R28 347 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 ARHGDIGQ99819 225 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 AIF1LQ9BQI0 150 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 DUSP23Q9BVJ7 150 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 PRR14Q9BWN1 585 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 C1QTNF2Q9BXJ5 285 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 COPZ2Q9P299 210 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 ELF5Q9UKW6 265 aaPredicted RBP10.72□□□□□ -0.69
USF1-201ENST00000368019 ING4Q9UNL4 249 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 GPR34Q9UPC5 381 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 UNC13CQ8NB66 2214 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 A0A1B0GVI7 797 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 WASHC1A8K0Z3 465 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 PLPP1O14494 284 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 SPINT1O43278 529 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 SLC28A2O43868 658 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 ICMTO60725 284 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 LRP4O75096 1905 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 ZIC2O95409 532 aaPredicted RBP10.71□□□□□ -0.69
USF1-201ENST00000368019 HMGN1P05114 100 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 PSKH1P11801 424 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 PEPDP12955 493 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 ACADLP28330 430 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 MMP12P39900 470 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 CCT3P49368 545 aaKnown RBP10.71□□□□□ -0.69
USF1-201ENST00000368019 GABREP78334 506 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 IL18Q14116 193 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 ISXQ2M1V0 245 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 SPDYE7PQ495Y7 208 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 PLA1AQ53H76 456 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 ZNF805Q5CZA5 627 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 AADACL4Q5VUY2 407 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 CD276Q5ZPR3 534 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 HBMQ6B0K9 141 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 TNFAIP8L2Q6P589 184 aaPredicted RBP10.71□□□□□ -0.69
USF1-201ENST00000368019 BAIAP2L2Q6UXY1 529 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 LIPIQ6XZB0 460 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 PARS2Q7L3T8 475 aaKnown RBP10.71□□□□□ -0.69
USF1-201ENST00000368019 ASPGQ86U10 573 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 TPRA1Q86W33 373 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 TRIM48Q8IWZ4 208 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 ELMOD2Q8IZ81 293 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 CADM2Q8N3J6 435 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 C9orf62Q8N4C0 152 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 OR5M3Q8NGP4 307 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 NEIL3Q8TAT5 605 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 IFI44Q8TCB0 444 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 AHCTF1Q8WYP5 2266 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 OSTF1Q92882 214 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 UCN3Q969E3 161 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 UPRTQ96BW1 309 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 DTD2Q96FN9 168 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 SCMH1Q96GD3 660 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 TREX2Q9BQ50 279 aaPredicted RBP10.71□□□□□ -0.69
USF1-201ENST00000368019 SAP130Q9H0E3 1048 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 SPNS1Q9H2V7 528 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 FN3KQ9H479 309 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 MVB12BQ9H7P6 319 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 PRM3Q9NNZ6 103 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 SLAMF7Q9NQ25 335 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 INPP5EQ9NRR6 644 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 CYSLTR2Q9NS75 346 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 CALML5Q9NZT1 146 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 CCDC88CQ9P219 2028 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 EIF3KQ9UBQ5 218 aaKnown RBP10.71□□□□□ -0.69
USF1-201ENST00000368019 KCNN3Q9UGI6 736 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 SH2B3Q9UQQ2 575 aa10.71□□□□□ -0.69
USF1-201ENST00000368019 MYO18BQ8IUG5 2567 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms