RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 HKR1P10072 659 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ALAS2P22557 587 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 TGM1P22735 817 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 KCNJ3P48549 501 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 COMPP49747 757 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 LTB4RQ15722 352 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 OR2L3Q8NG85 312 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 OR2T27Q8NH04 317 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 AGO4Q9HCK5 861 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 AADACP22760 399 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MIPP30301 263 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 GABRA2P47869 451 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 RARRES1P49788 294 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MAD2L1BPQ15013 274 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 AMBNQ9NP70 447 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PPP1R3CQ9UQK1 317 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PCDHGA9Q9Y5G4 932 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ACTL7AQ9Y615 435 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 WDR27A2RRH5 827 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ANKRD63C9JTQ0 380 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 K7EPI3 171 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 RFX5P48382 616 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 OVCH1Q7RTY7 1134 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ZFAND4Q86XD8 727 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PCDHGA7Q9Y5G6 932 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 LRRC37A3O60309 1634 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SLC6A8P48029 635 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FABP9Q0Z7S8 132 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 DGKZQ13574 1117 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 RAB39AQ14964 217 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ABCA11PQ4W5N1 156 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FCRL6Q6DN72 434 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MEX3BQ6ZN04 569 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 LSRQ86X29 649 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 A6NDN8 102 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 M0R082 166 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MMP23AO75900 390 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SRCP12931 536 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MMP9P14780 707 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 TPMTP51580 245 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 DET1Q7L5Y6 550 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 OR2W3Q7Z3T1 314 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SLC30A7Q8NEW0 376 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 OR6K2Q8NGY2 324 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 BORCS7Q96B45 105 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MTHFD2LQ9H903 347 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SLC22A23A1A5C7 686 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ICMTO60725 284 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 TNFSF15O95150 251 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 CCKBRP32239 447 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ARHGAP8P85298 464 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FGFBP1Q14512 234 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 BCL2L15Q5TBC7 163 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF691Q5VV52 312 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 CILP2Q8IUL8 1156 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF461Q8TAF7 563 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 NUDT8Q8WV74 236 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ARPC5LQ9BPX5 153 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 NICN1Q9BSH3 213 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 WBP1LQ9NX94 342 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 HMGA2P52926 109 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 KCNMB1Q16558 191 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ARSIQ5FYB1 569 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FBXW12Q6X9E4 464 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 OR2L13Q8N349 312 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MTMR14Q8NCE2 650 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 RNF170Q96K19 258 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 GABRPO00591 440 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 DVL2O14641 736 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF682O95780 498 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 GJB1P08034 283 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 GSG1LQ6UXU4 331 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SPATA2LQ8IUW3 424 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MMP21Q8N119 569 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 K7ERQ8 282 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ENDOGQ14249 297 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MAPK14Q16539 360 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 CD300LFQ8TDQ1 290 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 BORCS6Q96GS4 357 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 IGSF21Q96ID5 467 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ABHD1Q96SE0 405 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 IRF1P10914 325 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 HAAOP46952 286 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 CLCN3P51790 818 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ATXN1P54253 815 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PKIAP61925 76 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 STEAP1BQ6NZ63 245 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF707Q96C28 371 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SENP8Q96LD8 212 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ADAM18Q9Y3Q7 739 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SLC35G6P0C7Q6 338 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PSMB4P28070 264 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 RAB11AP62491 216 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 TAS1R3Q7RTX0 852 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 AKR7LQ8NHP1 331 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ASB12Q8WXK4 309 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 METTL1Q9UBP6 276 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FMO4P31512 558 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 CLCQ05315 142 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 JAZF1Q86VZ6 243 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms