RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 LINC00597Q9H2U6 94 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 DIMT1Q9UNQ2 313 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 HRH3Q9Y5N1 445 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 HEMK1Q9Y5R4 338 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNFX1Q9P2E3 1918 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 MN1Q10571 1320 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 A0A0U1RQS6 177 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 hCG_1807616A0A1W2PRN6 198 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TSPAN11A1L157 253 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TOR1AO14656 332 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF208O43345 1280 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 PROM1O43490 865 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 CSF2RAP15509 400 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 RAB6AP20340 208 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 GDI1P31150 447 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 FXYD6P3P58550 94 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 RAB8AP61006 207 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 FLYWCH1Q4VC44 716 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TANGO2Q6ICL3 276 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ARHGAP11AQ6P4F7 1023 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 FAM83FQ8NEG4 500 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZCCHC10Q8TBK6 192 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 FOXJ1Q92949 421 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 C1GALT1Q9NS00 363 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ICKQ9UPZ9 632 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 MED16Q9Y2X0 877 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 NOX1Q9Y5S8 564 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC31A1O15431 190 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 PRAF2O60831 178 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ASGR2P07307 311 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 NDUFA6P56556 154 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 KIR2DS3Q14952 304 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 PTPRRQ15256 657 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 SAXO2Q658L1 398 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 CCDC54Q8NEL0 328 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 FCRL1Q96LA6 429 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 SPOCK3Q9BQ16 436 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 GPATCH2Q9NW75 528 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 COPS3Q9UNS2 423 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 KCNK6Q9Y257 313 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 PARP14Q460N5 1801 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 A0A0G2JN53 185 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 A0A1B0GV50 99 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 A0A1W2PQL4 384 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 BLACEA4D250 179 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 EEF1E1-BLOC1S5C9J1V9 151 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 BHLHE40O14503 412 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 UCHL1P09936 223 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 BMP4P12644 408 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TPT1P13693 172 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF20P17024 532 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 RBMXP38159 391 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 MLC1Q15049 377 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 CLPPQ16740 277 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ADPRMQ3LIE5 342 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 CREB3L2Q70SY1 520 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZFP82Q8N141 532 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 FANK1Q8TC84 345 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TM4SF18Q96CE8 201 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 KCTD12Q96CX2 325 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 WDR34Q96EX3 536 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 MS4A4EQ96PG1 132 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC22A12Q96S37 553 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 DPYSL5Q9BPU6 564 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TXNL4BQ9NX01 149 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 B3GNT2Q9NY97 397 aa5.04□□□□□ -1.6
CDC42BPA-204ENST00000366767 TRAV20A0A0B4J274 112 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 POM121CA8CG34 1229 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 H7C417 338 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 RNGTTO60942 597 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 GASTP01350 101 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 IFNA5P01569 189 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 FUCA1P04066 466 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 PPP3CBP16298 524 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 TNFRSF1BP20333 461 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 NUDT1P36639 197 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 GNMTQ14749 295 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF77Q15935 545 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 CTU2Q2VPK5 515 aaKnown RBP5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 CACUL1Q86Y37 369 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 PTOV1Q86YD1 416 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 ST7LQ8TDW4 575 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 DCUN1D4Q92564 292 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 SAP130Q9H0E3 1048 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 CTPS2Q9NRF8 586 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF226Q9NYT6 803 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 CCL27Q9Y4X3 112 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 COL11A1P12107 1806 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 SIP14410 1827 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 GXYLT2A0PJZ3 443 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 CD8B2A6NJW9 211 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZAR1LA6NP61 321 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 CD8BP10966 210 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 GBX1Q14549 363 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 IER5LQ5T953 404 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF551Q7Z340 670 aaPredicted RBP5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 GALNT10Q86SR1 603 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF619Q8N2I2 560 aa5.03□□□□□ -1.6
CDC42BPA-204ENST00000366767 SUMF2Q8NBJ7 301 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms