RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 CT45A9P0DMV2 189 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 SOX3P41225 446 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 ZP2Q05996 745 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 CT45A2Q5DJT8 189 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 PAQR6Q6TCH4 344 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 HSDL2Q6YN16 418 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 KMT5CQ86Y97 462 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 ZNF440Q8IYI8 595 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 COX4I2Q96KJ9 171 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 CDADC1Q9BWV3 514 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 LANCL2Q9NS86 450 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 FLRT3Q9NZU0 649 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 RPS6KB2Q9UBS0 482 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 SSR3Q9UNL2 185 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 MN1Q10571 1320 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 FAM86C2PA6NEL3 165 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 EFCAB7A8K855 629 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 H3BMH7 237 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 SULT1C4O75897 302 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 ZGLP1P0C6A0 271 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 CD40LGP29965 261 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 S100A5P33763 92 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 RNF144AP50876 292 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 BNC1Q01954 994 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 DSG2Q14126 1118 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 DOC2BQ14184 412 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 ARMC4Q5T2S8 1044 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 ULK3Q6PHR2 472 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 SMARCD3Q6STE5 483 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 TTLL10Q6ZVT0 673 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 CXXC5Q7LFL8 322 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 PHC2Q8IXK0 858 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 UBALD2Q8IYN6 164 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 LNX2Q8N448 690 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 D2HGDHQ8N465 521 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 BCORP1Q8N888 145 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 PSD4Q8NDX1 1056 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 B4GALNT2Q8NHY0 566 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 GRHL3Q8TE85 626 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 PTCHD1Q96NR3 888 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 ZNF426Q9BUY5 554 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 JAM3Q9BX67 310 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 HOXD1Q9GZZ0 328 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 RNF167Q9H6Y7 350 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 EXOSC4Q9NPD3 245 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 ATP13A2Q9NQ11 1180 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 C20orf141Q9NUB4 165 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 FAIMQ9NVQ4 179 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 PEX16Q9Y5Y5 336 aa16.88■□□□□ 0.29
PDLIM7-203ENST00000359895 hCG_2014768A0A024R1R8 64 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 C17orf105B2RV13 164 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 KPNA4O00629 521 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 BHLHE40O14503 412 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 PFDN1O60925 122 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 CBFA2T3O75081 653 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 TSPAN19P0C672 248 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 TBXA2RP21731 343 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 CRYBB2P43320 205 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 PPP5CP53041 499 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 RPS3AP61247 264 aaKnown RBP16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 KCNAB1Q14722 419 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 SOWAHCQ53LP3 525 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 ALG10BQ5I7T1 473 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 YOD1Q5VVQ6 348 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 QSOX2Q6ZRP7 698 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 DCDC5Q6ZRR9 648 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 PRSS42Q7Z5A4 293 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 LAPTM4BQ86VI4 370 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 SLC35F3Q8IY50 421 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 GPR135Q8IZ08 494 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 PPP1R14BQ96C90 147 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 YIPF2Q9BWQ6 316 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 C6orf62Q9GZU0 229 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 ETAA1Q9NY74 926 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 SIGLEC7Q9Y286 467 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 SLC35A3Q9Y2D2 325 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 CARD8Q9Y2G2 431 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 SIT1Q9Y3P8 196 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 MAU2Q9Y6X3 613 aa16.87■□□□□ 0.29
PDLIM7-203ENST00000359895 ADAMTS20P59510 1910 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 A0A1B0GVT2 93 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 SERINC4A6NH21 518 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 POLR1CO15160 346 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 CLPSP04118 112 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 MSL3P1P0C860 447 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 SAGP10523 405 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 SEPHS1P49903 392 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 GPR143P51810 404 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 FXYD6P3P58550 94 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 TPBGQ13641 420 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 LINC00114Q6XXX2 140 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 CPOQ8IVL8 374 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 SLC25A45Q8N413 288 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 MINDY2Q8NBR6 621 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 SLC46A1Q96NT5 459 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 NDC1Q9BTX1 674 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 ASPNQ9BXN1 380 aa16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 HINT3Q9NQE9 182 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 CRNNQ9UBG3 495 aaPredicted RBP16.86■□□□□ 0.29
PDLIM7-203ENST00000359895 SPIN1Q9Y657 262 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms