RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 COL28A1Q2UY09 1125 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 HES5Q5TA89 166 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 CD276Q5ZPR3 534 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 PYHIN1Q6K0P9 492 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 NIPAL3Q6P499 406 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ALKAL2Q6UX46 152 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 MRGPREQ86SM8 312 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 SLC51BQ86UW2 128 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 IQCF2Q8IXL9 164 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 RPLP0P6Q8NHW5 317 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 COQ8AQ8NI60 647 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ACOT12Q8WYK0 555 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 CDS1Q92903 461 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 PTP4A1Q93096 173 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF558Q96NG5 402 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 IFT27Q9BW83 186 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 B3GNT4Q9C0J1 378 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 SLC25A18Q9H1K4 315 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 FKRPQ9H9S5 495 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 TRIM36Q9NQ86 728 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 CA10Q9NS85 328 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 NUBP2Q9Y5Y2 271 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 A0A087WV48 116 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 LRIT2A6NDA9 550 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 CHURC1-FNTBB4DL54 471 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 PAPLNO95428 1278 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 SIX6O95475 246 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ACSM4P0C7M7 580 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 SAGP10523 405 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-203ENST00000356147 RAB3BP20337 219 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 PSMB10P40306 273 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 NAA10P41227 235 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-203ENST00000356147 CSNK1G2P78368 415 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 MELKQ14680 651 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 TUSC1Q2TAM9 212 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 TCTE1Q5JU00 501 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 FAM111BQ6SJ93 734 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 AMZ2Q86W34 360 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 C12orf40Q86WS4 652 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 DCUN1D3Q8IWE4 304 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 SLC39A11Q8N1S5 342 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF433Q8N7K0 673 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-203ENST00000356147 OR2L2Q8NH16 312 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 SETD7Q8WTS6 366 aaKnown RBP9.42□□□□□ -0.9
PTPRA-203ENST00000356147 RBPMSQ93062 196 aaKnown RBP9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ARRDC3Q96B67 414 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ELMOD3Q96FG2 381 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 OR2M2Q96R28 347 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 UBL7Q96S82 380 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-203ENST00000356147 PDCD1LG2Q9BQ51 273 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF559Q9BR84 538 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 GPR174Q9BXC1 333 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 SEMA4CQ9C0C4 833 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ACSS1Q9NUB1 689 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-203ENST00000356147 KLK11Q9UBX7 282 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ATG2BQ96BY7 2078 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 TEX51A0A1B0GUA7 166 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 A0A1W2PPV9 198 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 IMPA2O14732 288 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ARPC1BO15143 372 aaKnown RBP9.42□□□□□ -0.9
PTPRA-203ENST00000356147 SERPINI2O75830 405 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 DRD2P14416 443 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 FPR3P25089 353 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 LCN1P31025 176 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 GDNFP39905 211 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 RAD52P43351 418 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 TAGLNQ01995 201 aaKnown RBP9.42□□□□□ -0.9
PTPRA-203ENST00000356147 SLC9A5Q14940 896 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 FAAH2Q6GMR7 532 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 TMEM81Q6P7N7 255 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 NHLRC1Q6VVB1 395 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 CFAP77Q6ZQR2 320 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ACOT4Q8N9L9 421 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 FANK1Q8TC84 345 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 LGALS14Q8TCE9 139 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 GRHL3Q8TE85 626 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 SLC35A4Q96G79 324 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 SFXN2Q96NB2 322 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 FERD3LQ96RJ6 166 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 FAM83CQ9BQN1 747 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 TEX12Q9BXU0 123 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 C20orf85Q9H1P6 137 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 RHBGQ9H310 441 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 FBXO34Q9NWN3 711 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 MARK1Q9P0L2 795 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ENTPD4Q9Y227 616 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 PLEKHM1Q9Y4G2 1056 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 ASB4Q9Y574 426 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 MEIKINA0A087WXM9 373 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 A0A0A6YYD5 115 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 A0A0G2JPF8 293 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 OR52A4PA6NMU1 304 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 HNRNPCL2B2RXH8 293 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 HNRNPCL3B7ZW38 293 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 SLC9A3R1O14745 358 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-203ENST00000356147 OR5F1O95221 314 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 TFP02787 698 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 SULT1A3P0DMM9 295 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 SULT1A4P0DMN0 295 aa9.41□□□□□ -0.9
PTPRA-203ENST00000356147 HNRNPCL4P0DMR1 293 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms