RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 GCGRP47871 477 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 CD226Q15762 336 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 KLHL12Q53G59 568 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 TCTE1Q5JU00 501 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 SLC27A4Q6P1M0 643 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 DHRS4L2Q6PKH6 230 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 THSD4Q6ZMP0 1018 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 TMEM239Q8WW34 195 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 PMEPA1Q969W9 287 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 DEPDC7Q96QD5 511 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 TUBA1CQ9BQE3 449 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 ZNF304Q9HCX3 659 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 FBXL4Q9UKA2 621 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 TEX51A0A1B0GUA7 166 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 A0A1B0GWA3 101 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 NADKO95544 446 aaPredicted RBP16.25■□□□□ 0.19
NPAS3-202ENST00000356141 AGR2O95994 175 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 MRPL3P09001 348 aaKnown RBP16.25■□□□□ 0.19
NPAS3-202ENST00000356141 HPGDP15428 266 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 NR0B1P51843 470 aaKnown RBP16.25■□□□□ 0.19
NPAS3-202ENST00000356141 FAM199XQ6PEV8 388 aaPredicted RBP16.25■□□□□ 0.19
NPAS3-202ENST00000356141 TBC1D15Q8TC07 691 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 PHOSPHO1Q8TCT1 267 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 C8orf44Q96CB5 159 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 PLEKHA8Q96JA3 519 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 TOR4AQ9NXH8 423 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 YARS2Q9Y2Z4 477 aaKnown RBP16.25■□□□□ 0.19
NPAS3-202ENST00000356141 CORINQ9Y5Q5 1042 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 CACNA1CQ13936 2221 aa16.25■□□□□ 0.19
NPAS3-202ENST00000356141 C4orf47A7E2U8 309 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 EFCAB9A8MZ26 197 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 IMPA2O14732 288 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 SOX30O94993 753 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 CSTAP01040 98 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 EPHA8P29322 1005 aaPredicted RBP16.24■□□□□ 0.19
NPAS3-202ENST00000356141 TTKP33981 857 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 TGM4P49221 684 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 TMBIM6P55061 237 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 CRYZQ08257 329 aaKnown RBP16.24■□□□□ 0.19
NPAS3-202ENST00000356141 PLK5Q496M5 336 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 ALG10BQ5I7T1 473 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 KIRREL2Q6UWL6 708 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 APOOLQ6UXV4 268 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 FAM174AQ8TBP5 190 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 GNPDA2Q8TDQ7 276 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 IPCEF1Q8WWN9 437 aaPredicted RBP16.24■□□□□ 0.19
NPAS3-202ENST00000356141 TP53INP1Q96A56 240 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 Q96MT0 163 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 ZNF582Q96NG8 517 aaPredicted RBP16.24■□□□□ 0.19
NPAS3-202ENST00000356141 IER2Q9BTL4 223 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 HCAR1Q9BXC0 346 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 MEPEQ9NQ76 525 aaPredicted RBP16.24■□□□□ 0.19
NPAS3-202ENST00000356141 TBCCD1Q9NVR7 557 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 A0A1W2PPC1 479 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 AIREO43918 545 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 PRAMEF2O60811 474 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 C12orf73Q69YU5 71 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 ZNF420Q8TAQ5 688 aaPredicted RBP16.24■□□□□ 0.19
NPAS3-202ENST00000356141 YIPF6Q96EC8 236 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 CCNB1IP1Q9NPC3 277 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 TIMMDC1Q9NPL8 285 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 SERTAD3Q9UJW9 196 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 SDK2Q58EX2 2172 aa16.24■□□□□ 0.19
NPAS3-202ENST00000356141 TRAPPC13A5PLN9 417 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 CNOT3O75175 753 aaKnown RBP16.23■□□□□ 0.19
NPAS3-202ENST00000356141 REM1O75628 298 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 ATP6V1E1P36543 226 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 SMSP52788 366 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 SYT6Q5T7P8 510 aaPredicted RBP16.23■□□□□ 0.19
NPAS3-202ENST00000356141 PMS2CLQ68D20 193 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 PLBD1Q6P4A8 553 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 UBALD2Q8IYN6 164 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 SLC2A12Q8TD20 617 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 GATAD2BQ8WXI9 593 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 LGALS12Q96DT0 336 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 STACQ99469 402 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 NUDT9Q9BW91 350 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 OR51V1Q9H2C8 321 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 DNAJB12Q9NXW2 375 aaKnown RBP16.23■□□□□ 0.19
NPAS3-202ENST00000356141 KNTC1P50748 2209 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 AHCTF1Q8WYP5 2266 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 PCNX3Q9H6A9 2034 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 SLC35F4A4IF30 521 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 MASP2O00187 686 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 ZGLP1P0C6A0 271 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 ETV5P41161 510 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 ETV1P50549 477 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 SKP1P63208 163 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 DAB2P98082 770 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 TSPAN31Q12999 210 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 TRIM61Q5EBN2 209 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 LIPKQ5VXJ0 399 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 OTPQ5XKR4 325 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 LCN10Q6JVE6 187 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 MBOAT2Q6ZWT7 520 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 MAML2Q8IZL2 1156 aaPredicted RBP16.23■□□□□ 0.19
NPAS3-202ENST00000356141 ZNF615Q8N8J6 731 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 OR8J1Q8NGP2 316 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 FANK1Q8TC84 345 aa16.23■□□□□ 0.19
NPAS3-202ENST00000356141 DOK1Q99704 481 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms