RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 WNT16Q9UBV4 365 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 DHDHQ9UQ10 334 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 FARSAQ9Y285 508 aaKnown RBP12.77□□□□□ -0.37
SMC6-201ENST00000351948 CDH10Q9Y6N8 788 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 TACR3P29371 465 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 NCS1P62166 190 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 RAB11FIP2Q7L804 512 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 SMRP1Q8NCR6 262 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 EDEM2Q9BV94 578 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 TMEM14AQ9Y6G1 99 aa12.77□□□□□ -0.37
SMC6-201ENST00000351948 IDSB3KWA1 339 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 KDM4BO94953 1096 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 PSMD7P51665 324 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 ACTC1P68032 377 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 ACTA1P68133 377 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 MFSD12Q6NUT3 480 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 MARCH3Q86UD3 253 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 LILRA2Q8N149 483 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 METTL25Q8N6Q8 603 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 LCORQ96JN0 433 aaPredicted RBP12.76□□□□□ -0.37
SMC6-201ENST00000351948 PCDHGB5Q9Y5G0 923 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 HTR3EA5X5Y0 456 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 KIAA0513O60268 411 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 ALOX12BO75342 701 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 PSMB10P40306 273 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 GPR85P60893 370 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 DUSP5Q16690 384 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 ZNF367Q7RTV3 350 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 TMEM151AQ8N4L1 468 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 OR4C15Q8NGM1 316 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 OR6T1Q8NGN1 323 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 DMRTB1Q96MA1 342 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 EBF1Q9UH73 591 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 NUP214P35658 2090 aaPredicted RBP12.76□□□□□ -0.37
SMC6-201ENST00000351948 YKT6O15498 198 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 SLC16A7O60669 478 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 ATE1O95260 518 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 UTS2O95399 124 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 MYF6P23409 242 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 CASP6P55212 293 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 CBLBQ13191 982 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 ESX1Q8N693 406 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
SMC6-201ENST00000351948 NEURL3Q96EH8 262 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 MED20Q9H944 212 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 TUBA8Q9NY65 449 aaPredicted RBP12.76□□□□□ -0.37
SMC6-201ENST00000351948 CLCA1A8K7I4 914 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 GASTP01350 101 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 CD79AP11912 226 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 PRPS1P60891 318 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 UBE2NP61088 152 aaKnown RBP12.76□□□□□ -0.37
SMC6-201ENST00000351948 LRRC69Q6ZNQ3 347 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 AKAP14Q86UN6 197 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 TOMM5Q8N4H5 51 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 LGALS12Q96DT0 336 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 IRF2BPLQ9H1B7 796 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 MED28Q9H204 178 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 DDX31Q9H8H2 851 aaKnown RBP12.76□□□□□ -0.37
SMC6-201ENST00000351948 SLC6A20Q9NP91 592 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 PRDM9Q9NQV7 894 aa12.76□□□□□ -0.37
SMC6-201ENST00000351948 OR2T1O43869 369 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 CSF2P04141 144 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 C7P10643 843 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 MAPK3P27361 379 aaPredicted RBP12.75□□□□□ -0.37
SMC6-201ENST00000351948 SOX3P41225 446 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 WBP2NLQ6ICG8 309 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 PGM2L1Q6PCE3 622 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 OR5M1Q8NGP8 315 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 STT3BQ8TCJ2 826 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 PIGUQ9H490 435 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 MED11Q9P086 117 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 MBD1Q9UIS9 605 aaPredicted RBP12.75□□□□□ -0.37
SMC6-201ENST00000351948 ING4Q9UNL4 249 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 RGPD4Q7Z3J3 1758 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 METTL21EPA6NDL7 271 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 SERINC4A6NH21 518 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 TARM1B6A8C7 271 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 WDPCPO95876 746 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 AKIRIN2Q53H80 203 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 TMED4Q7Z7H5 227 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 FUNDC2Q9BWH2 189 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 CACNA1EQ15878 2313 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 LMO7DNF2Z398 122 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 DENRO43583 198 aaKnown RBP12.75□□□□□ -0.37
SMC6-201ENST00000351948 GADD45AP24522 165 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 C21orf33P30042 268 aaPredicted RBP12.75□□□□□ -0.37
SMC6-201ENST00000351948 DUSP7Q16829 419 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 GPN1Q9HCN4 374 aaPredicted RBP12.75□□□□□ -0.37
SMC6-201ENST00000351948 PAK1IP1Q9NWT1 392 aaPredicted RBP12.75□□□□□ -0.37
SMC6-201ENST00000351948 KDM4EB2RXH2 506 aaPredicted RBP12.75□□□□□ -0.37
SMC6-201ENST00000351948 GLB1P16278 677 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 SPEM2Q0P670 501 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 HYAL4Q2M3T9 481 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 GARNL3Q5VVW2 1013 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 B3GNT7Q8NFL0 401 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 LRRN3Q9H3W5 708 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 WRBO00258 174 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 SSR4P51571 173 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 C4orf46Q504U0 113 aa12.75□□□□□ -0.37
SMC6-201ENST00000351948 SLC6A19Q695T7 634 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms