RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SIX6O95475 246 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 C1orf105O95561 183 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 SOD2P04179 222 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 S100A6P06703 90 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 ASGR2P07307 311 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 NPPBP16860 134 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 RAB3BP20337 219 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 SDHBP21912 280 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 MST1P26927 711 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 IFNGR2P38484 337 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 STAT5AP42229 794 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 ZNF157P51786 506 aaPredicted RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 PRMT2P55345 433 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 TBPL1P62380 186 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 ERVK-25P63136 954 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 KRT33BQ14525 404 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 OLFML2AQ68BL7 652 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 SLC25A25Q6KCM7 469 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 TNFAIP8L2Q6P589 184 aaPredicted RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 UQCC3Q6UW78 93 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 NXPE4Q6UWF7 544 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 CXXC5Q7LFL8 322 aaKnown RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 NRSN1Q8IZ57 195 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 SLC44A3Q8N4M1 653 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 BPIFCQ8NFQ6 507 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 DMBX1Q8NFW5 382 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 THEM6Q8WUY1 208 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 ZNF480Q8WV37 535 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 INTS12Q96CB8 462 aaKnown RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 IGSF21Q96ID5 467 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 SLC22A12Q96S37 553 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 TEX12Q9BXU0 123 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 LINC00597Q9H2U6 94 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 AUNIPQ9H7T9 357 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 DDX31Q9H8H2 851 aaKnown RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 IL21Q9HBE4 155 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 BARX1Q9HBU1 254 aaPredicted RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 TRIM36Q9NQ86 728 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 CTPS2Q9NRF8 586 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 ZNF69Q9UC07 566 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 OPN4Q9UHM6 478 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 MRTO4Q9UKD2 239 aaKnown RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 NINQ8N4C6 2090 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 TRAV1-2A0A0B4J238 106 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 CHURC1-FNTBB4DL54 471 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 M0R3H8 397 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 GNB5O14775 395 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 CTSAP10619 480 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 PRKAR2AP13861 404 aaKnown RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 RPA2P15927 270 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 MPGP29372 298 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 FRKP42685 505 aaPredicted RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 DLX5P56178 289 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 MLC1Q15049 377 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 ZNF658BQ4V348 819 aaPredicted RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 TMEM255AQ5JRV8 349 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 FAM27D1Q5T7N8 215 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 COMTD1Q86VU5 262 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 KRT78Q8N1N4 520 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 ACBD7Q8N6N7 88 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 SLC22A8Q8TCC7 542 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 GLYATL1Q969I3 302 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 NARS2Q96I59 477 aaKnown RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 TIMP4Q99727 224 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 MFRPQ9BY79 579 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 SLC6A16Q9GZN6 736 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 PITHD1Q9GZP4 211 aaPredicted RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 PRM3Q9NNZ6 103 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 MRPL17Q9NRX2 175 aaKnown RBP9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 TAAR2Q9P1P5 351 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 TINAGQ9UJW2 476 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 RCE1Q9Y256 329 aa9.61□□□□□ -0.87
CHRNA1-202ENST00000348749 HMGN4O00479 90 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 EGFP01133 1207 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 FABP1P07148 127 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 IL3P08700 152 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 UBBP0CG47 229 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 UBCP0CG48 685 aaKnown RBP9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 SMIM6P0DI80 62 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 PVALBP20472 110 aaPredicted RBP9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 ATP6V1E1P36543 226 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 TAS2R43P59537 309 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 RPS26P62854 115 aaKnown RBP9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 RPS27AP62979 156 aaKnown RBP9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 UBA52P62987 128 aaKnown RBP9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 SREBF2Q12772 1141 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 IL10RAQ13651 578 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 HAGHLQ6PII5 290 aaPredicted RBP9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 DBX2Q6ZNG2 339 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 PGAP1Q75T13 922 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 PRSS45Q7RTY3 260 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 HSD11B1LQ7Z5J1 315 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 CEACAM19Q7Z692 300 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 CCDC36Q8IYA8 594 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 GJD3Q8N144 294 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 SIRT6Q8N6T7 355 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 RASGEF1AQ8N9B8 481 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 OR9A1PQ8NGU1 263 aa9.6□□□□□ -0.87
CHRNA1-202ENST00000348749 OR10K1Q8NGX5 313 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms