RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 PNLDC1Q8NA58 520 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 SFT2D1Q8WV19 159 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 FRZBQ92765 325 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 MCHR1Q99705 422 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 ORAI3Q9BRQ5 295 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 OR51I1Q9H343 314 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 CDH10Q9Y6N8 788 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 LOC102724200A0A096LPH7 203 aaPredicted RBP10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 HCKP08631 526 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 DRD5P21918 477 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 FBLP22087 321 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 ARSDP51689 593 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 RAP1AP62834 184 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 ABRAXAS2Q15018 415 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 ACTBL2Q562R1 376 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 CHRDL2Q6WN34 429 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 ZC3H3Q8IXZ2 948 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 ZNF611Q8N823 705 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 DPH7Q9BTV6 452 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 BOCQ9BWV1 1114 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 ACTRT3Q9BYD9 372 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 KCMF1Q9P0J7 381 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 USP36Q9P275 1121 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 DIMT1Q9UNQ2 313 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 LRP6O75581 1613 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 NPIPA5A0A0B4J1W7 369 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 TRABD2BA6NFA1 517 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 GGT3PA6NGU5 568 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 S1PR4O95977 384 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 SPI1P17947 270 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 GGT2P36268 569 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 KCNC3Q14003 757 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 ZNF630Q2M218 657 aaPredicted RBP10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 C2orf76Q3KRA6 126 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 DNM1P34Q6PK57 102 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 IL22RA1Q8N6P7 574 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 STRADBQ9C0K7 418 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 PCDHGB5Q9Y5G0 923 aa10.46□□□□□ -0.73
SMARCE1-202ENST00000348513 GOLGA4Q13439 2230 aaKnown RBP10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 H3BQ06 376 aaPredicted RBP10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 ZNF623O75123 536 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 STSP08842 583 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 BIDP55957 195 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 CLRN1P58418 232 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 C6orf136Q5SQH8 315 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 IER5LQ5T953 404 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 CYB5R2Q6BCY4 276 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 LCN8Q6JVE9 175 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 PET117Q6UWS5 81 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 NLGN4XQ8N0W4 816 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 ADAMTS19Q8TE59 1207 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 ZDHHC5Q9C0B5 715 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 PGAP2Q9UHJ9 254 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 C10orf71Q711Q0 1435 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 LNP1A1A4G5 178 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 METTL15A6NJ78 407 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 MED6O75586 246 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 CSTBP04080 98 aaKnown RBP10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 AQP2P41181 271 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 PXNP49023 591 aaPredicted RBP10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 ELAVL3Q14576 367 aaKnown RBP10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 MOGAT2Q3SYC2 334 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 LDLRAD1Q5T700 205 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 C17orf99Q6UX52 265 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 VRK3Q8IV63 474 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 SLC44A3Q8N4M1 653 aa10.46□□□□□ -0.74
SMARCE1-202ENST00000348513 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 GABARAPO95166 117 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 ALDOAP04075 364 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 SPNP16150 400 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 MC3RP41968 323 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 GZMKP49863 264 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 KEAP1Q14145 624 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 REEP3Q6NUK4 255 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 NUP43Q8NFH3 380 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 HAS2Q92819 552 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 CNTNAP3Q9BZ76 1288 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 OR11A1Q9GZK7 315 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 ESRP2Q9H6T0 727 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 PTGES2Q9H7Z7 377 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 FAM230AA0A1W2PPH8 454 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 UQCRC2P22695 453 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 PPT1P50897 306 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 DNAJB13P59910 316 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 BTG1P62324 171 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 ABHD18Q0P651 414 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 GRM7Q14831 915 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 DEFB110Q30KQ9 67 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 TECRLQ5HYJ1 363 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 SPIN3Q5JUX0 258 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 KCNIP4Q6PIL6 250 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 OR13C2Q8NGS9 318 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 RNF141Q8WVD5 230 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 RAB7BQ96AH8 199 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 PIP5K1AQ99755 562 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 CMKLR1Q99788 373 aa10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 DPH2Q9BQC3 489 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-202ENST00000348513 TIMM29Q9BSF4 260 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms