RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 HOXC5Q00444 222 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 ZNF550Q7Z398 422 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 CARM1Q86X55 608 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 RBM45Q8IUH3 476 aaKnown RBP12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 LACC1Q8IV20 430 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 ZNF440Q8IYI8 595 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 OR1J4Q8NGS1 313 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 VANGL1Q8TAA9 524 aaPredicted RBP12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 CANT1Q8WVQ1 401 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 GEMIN6Q8WXD5 167 aaKnown RBP12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 POP5Q969H6 163 aaKnown RBP12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 SLC35B4Q969S0 331 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 ARSGQ96EG1 525 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 GNRHR2Q96P88 292 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 SEPHS2Q99611 448 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 DSN1Q9H410 356 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 ZFP64Q9NPA5 681 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 FBXL2Q9UKC9 423 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 BOKQ9UMX3 212 aaPredicted RBP12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 B3GNT3Q9Y2A9 372 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 NINQ8N4C6 2090 aa12.5□□□□□ -0.41
TUBA1B-202ENST00000336023 DHRS12A0PJE2 317 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 LRRC3CA6NJW4 275 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 UMPSP11172 480 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 ELAVL4P26378 380 aaKnown RBP12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 RYKP34925 604 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 ACAA2P42765 397 aaKnown RBP12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 P2RX1P51575 399 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 KCNC4Q03721 635 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 ADGRG5Q8IZF4 528 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 FADS6Q8N9I5 356 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 OR2M3Q8NG83 312 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 OR4K17Q8NGC6 315 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 OR6T1Q8NGN1 323 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 OR5W2Q8NH69 310 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 RSRC1Q96IZ7 334 aaKnown RBP12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 KLHDC3Q9BQ90 382 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 UGT2B28Q9BY64 529 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 EVA1AQ9H8M9 152 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 ANAPC2Q9UJX6 822 aa12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 TNRC6AQ8NDV7 1962 aaKnown RBP12.49□□□□□ -0.41
TUBA1B-202ENST00000336023 ERVH48-1M5A8F1 160 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 AP3D1O14617 1153 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 TPST2O60704 377 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 NUDT14O95848 222 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 GPIP06744 558 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 LINGO3P0C6S8 592 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 PSMA4P25789 261 aaKnown RBP12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 RFC3P40938 356 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 ZNF136P52737 540 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 SUMO3P55854 103 aaPredicted RBP12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 EPS8Q12929 822 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 NPTX1Q15818 432 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 PLEKHN1Q494U1 663 aaPredicted RBP12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 NADK2Q4G0N4 442 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 FAM98BQ52LJ0 330 aaKnown RBP12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 SLC6A19Q695T7 634 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 ZFP62Q8NB50 900 aaPredicted RBP12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 TOR1AIP2Q8NFQ8 470 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 SLC39A7Q92504 469 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 SLC47A1Q96FL8 570 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 PRR14Q9BWN1 585 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 AURKCQ9UQB9 309 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 SPENQ96T58 3664 aaKnown RBP12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 ANKUB1A6NFN9 424 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 CDC40O60508 579 aaKnown RBP eCLIP12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 CBR3O75828 277 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 SEMG1P04279 462 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 IFNW1P05000 195 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 RFPL3SP0C7P2 107 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 SLC6A8P48029 635 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 PLGLB1Q02325 96 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 CHRNB3Q05901 458 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 CBFBQ13951 182 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 FAM98AQ8NCA5 519 aaKnown RBP12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 GPR119Q8TDV5 335 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 C7orf34Q96L11 122 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 TTTY12Q9BZ98 90 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 AMBRA1Q9C0C7 1298 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 SLC25A18Q9H1K4 315 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 MAGIXQ9H6Y5 334 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 PTGES2Q9H7Z7 377 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 IL1RAPQ9NPH3 570 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 LHX6Q9UPM6 363 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 C15orf41Q9Y2V0 281 aa12.48□□□□□ -0.41
TUBA1B-202ENST00000336023 ENTPD5O75356 428 aa12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 GLSO94925 669 aaPredicted RBP12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 RAP2AP10114 183 aa12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 SFTPCP11686 197 aa12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 UQCRBP14927 111 aa12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 PGCP20142 388 aa12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 IDH2P48735 452 aaKnown RBP12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 PPIAP62937 165 aaKnown RBP12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 VLDLRP98155 873 aa12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 PMP22Q01453 160 aa12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 TOMM34Q15785 309 aaPredicted RBP12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 ARSKQ6UWY0 536 aa12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 DEF8Q6ZN54 512 aa12.47□□□□□ -0.41
TUBA1B-202ENST00000336023 RANBP3LQ86VV4 465 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms