RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 RASD1Q9Y272 281 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 FCF1Q9Y324 198 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 B3GALT1Q9Y5Z6 326 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 IGLV3-22A0A075B6J6 115 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 FABP6P51161 128 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR4D2P58180 307 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 ADARB1P78563 741 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR4C11Q6IEV9 310 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 GRINAQ7Z429 371 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR5M3Q8NGP4 307 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 TMEM125Q96AQ2 219 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 BEX1Q9HBH7 125 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 ADAM29Q9UKF5 820 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 DIMT1Q9UNQ2 313 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 NPFFR2Q9Y5X5 522 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 COL2A1P02458 1487 aaPredicted RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 GABRPO00591 440 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 TNFP01375 233 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 CHRM5P08912 532 aaPredicted RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR12D1P0DN82 309 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 NAT1P18440 290 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 MC3RP41968 323 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR1E2P47887 323 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 TAS2R38P59533 333 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 ADGRE4PQ86SQ3 457 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR5M8Q8NGP6 311 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 TRMT61BQ9BVS5 477 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 TAF9BQ9HBM6 251 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 IL37Q9NZH6 218 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 SNRPGP15A8MWD9 76 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 MSTNO14793 375 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 TGM5O43548 720 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 DPM1O60762 260 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 CR2P20023 1033 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 SDHBP21912 280 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 CHRNEQ04844 493 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 PAGE3Q5JUK9 113 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 NXNL2Q5VZ03 156 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 IL17RCQ8NAC3 791 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 CPT1CQ8TCG5 803 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 C16orf78Q8WTQ4 265 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 UBTD2Q8WUN7 234 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF566Q969W8 418 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF251Q9BRH9 671 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 NMNAT1Q9HAN9 279 aaPredicted RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 ARRDC5A6NEK1 342 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 BMP4P12644 408 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 F2RL1P55085 397 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 MOGAT2Q3SYC2 334 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR6F1Q8NGZ6 308 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 APH1BQ8WW43 257 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 ST8SIA4Q92187 359 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 EDAQ92838 391 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 HRASLS5Q96KN8 279 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 DCLRE1CQ96SD1 692 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 SEMA6CQ9H3T2 930 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 FZD3Q9NPG1 666 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 NDUFB11Q9NX14 153 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 CD84Q9UIB8 345 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 SLC38A8A6NNN8 435 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 E5RGE8 158 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 SAP18O00422 153 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 SMAD9O15198 467 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 GATCO43716 136 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 CELF2O95319 508 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 GBAP04062 536 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 NAGAP17050 411 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 GABRR2P28476 465 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 FUT10Q6P4F1 479 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 USP51Q70EK9 711 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 FRMD1Q8N878 549 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 SUMF1Q8NBK3 374 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 FAM110BQ8TC76 370 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 PHYHIPLQ96FC7 376 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 ZNF629Q9UEG4 869 aaPredicted RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 BACE2Q9Y5Z0 518 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 KIF13BQ9NQT8 1826 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 APOA2P02652 100 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 PRAMEF8Q5VWM4 474 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 PRAMEF7Q5VXH5 474 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 SFXN4Q6P4A7 337 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 APOOLQ6UXV4 268 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 PPP1R3BQ86XI6 285 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 PTRH1Q86Y79 214 aaKnown RBP5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR13C2Q8NGS9 318 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR10Z1Q8NGY1 313 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 PMM1Q92871 262 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 C14orf79Q96F83 325 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR10A5Q9H207 317 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 OR10A2Q9H208 303 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 HRH4Q9H3N8 390 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 SERTAD4Q9NUC0 356 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 DNAJC15Q9Y5T4 150 aa5.21□□□□□ -1.58
PTPRB-202ENST00000334414 C4AP0C0L4 1744 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 C4BP0C0L5 1744 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 RAF1P04049 648 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 HBQ1P09105 142 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 ITGB5P18084 799 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 OPRD1P41143 372 aa5.2□□□□□ -1.58
PTPRB-202ENST00000334414 PDZK1IP1Q13113 114 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms