RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 CACNA1CQ13936 2221 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 A0A0G2JNJ9 132 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 A0A0G2JPF8 293 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 AGAP5A6NIR3 686 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 HNRNPCL2B2RXH8 293 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 HNRNPCL3B7ZW38 293 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 HNRNPCL1O60812 293 aaKnown RBP12.65□□□□□ -0.38
LIMS1-201ENST00000332345 DBIP07108 87 aaKnown RBP12.65□□□□□ -0.38
LIMS1-201ENST00000332345 CHRM4P08173 479 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 LINGO3P0C6S8 592 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 HNRNPCL4P0DMR1 293 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 HOXB9P17482 250 aaPredicted RBP12.65□□□□□ -0.38
LIMS1-201ENST00000332345 ME2P23368 584 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 ADSLP30566 484 aaPredicted RBP12.65□□□□□ -0.38
LIMS1-201ENST00000332345 CEACAM8P31997 349 aaPredicted RBP12.65□□□□□ -0.38
LIMS1-201ENST00000332345 CRISP3P54108 245 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 RPS3AP61247 264 aaKnown RBP12.65□□□□□ -0.38
LIMS1-201ENST00000332345 RAC1P63000 192 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 FGFBP1Q14512 234 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 SEM1Q6ZVN7 128 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 CMIPQ8IY22 773 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 DPP10Q8N608 796 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 SLC38A5Q8WUX1 472 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 WNT2BQ93097 391 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 TM9SF2Q99805 663 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 CACYBPQ9HB71 228 aaKnown RBP12.65□□□□□ -0.38
LIMS1-201ENST00000332345 SLC25A37Q9NYZ2 338 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 VAPAQ9P0L0 249 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.65□□□□□ -0.38
LIMS1-201ENST00000332345 Q9UFV3 132 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 L3MBTL1Q9Y468 752 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 GMEB1Q9Y692 573 aa12.65□□□□□ -0.38
LIMS1-201ENST00000332345 MBD3L4A6NDZ8 208 aaPredicted RBP12.64□□□□□ -0.39
LIMS1-201ENST00000332345 MBD3L3A6NE82 208 aaPredicted RBP12.64□□□□□ -0.39
LIMS1-201ENST00000332345 MBD3L5A6NJ08 208 aaPredicted RBP12.64□□□□□ -0.39
LIMS1-201ENST00000332345 CLCA1A8K7I4 914 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 SHISA8B8ZZ34 492 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 C5orf58C9J3I9 102 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 OIP5O43482 229 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 BCHEP06276 602 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 UBTFL6P0CB48 400 aaPredicted RBP12.64□□□□□ -0.39
LIMS1-201ENST00000332345 BMP2P12643 396 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 CD1EP15812 388 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 PGCP20142 388 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 PGM1P36871 562 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 SLC6A8P48029 635 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 CCR4P51679 360 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 SKP2Q13309 424 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 MAPRE2Q15555 327 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 ZSWIM7Q19AV6 140 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 PRAMEF8Q5VWM4 474 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 PRAMEF7Q5VXH5 474 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 DLEU7Q6UYE1 221 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 ADGRE4PQ86SQ3 457 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 METTL25Q8N6Q8 603 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 TNIP2Q8NFZ5 429 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 MBD3L2Q8NHZ7 208 aaPredicted RBP12.64□□□□□ -0.39
LIMS1-201ENST00000332345 TMEM234Q8WY98 164 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 SMPDL3BQ92485 455 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 MRGPRX4Q96LA9 322 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 RNF145Q96MT1 663 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 ZFP3Q96NJ6 502 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 THUMPD3Q9BV44 507 aaKnown RBP12.64□□□□□ -0.39
LIMS1-201ENST00000332345 QRSL1Q9H0R6 528 aaKnown RBP12.64□□□□□ -0.39
LIMS1-201ENST00000332345 ARMC7Q9H6L4 198 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 A4GALTQ9NPC4 353 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 SAR1AQ9NR31 198 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 PAQR5Q9NXK6 330 aaPredicted RBP12.64□□□□□ -0.39
LIMS1-201ENST00000332345 ZNF629Q9UEG4 869 aaPredicted RBP12.64□□□□□ -0.39
LIMS1-201ENST00000332345 DOCK7Q96N67 2140 aa12.64□□□□□ -0.39
LIMS1-201ENST00000332345 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 CENPVL1A0A0U1RR11 272 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 GJE1A6NN92 205 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 DVL2O14641 736 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 SEC14L5O43304 696 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 DNAJA2O60884 412 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 TOXO94900 526 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 RCBTB2O95199 551 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 GPX2P18283 190 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 CTSSP25774 331 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 PSMA4P25789 261 aaKnown RBP12.63□□□□□ -0.39
LIMS1-201ENST00000332345 COL8A1P27658 744 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 SUCLG1P53597 346 aaKnown RBP12.63□□□□□ -0.39
LIMS1-201ENST00000332345 CLDN20P56880 219 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 EEF1A1P68104 462 aaKnown RBP12.63□□□□□ -0.39
LIMS1-201ENST00000332345 KLF10Q13118 480 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 LARS2Q15031 903 aaKnown RBP12.63□□□□□ -0.39
LIMS1-201ENST00000332345 QPRTQ15274 297 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 CDSNQ15517 529 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 SGCBQ16585 318 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 NDUFAF6Q330K2 333 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 SLC25A35Q3KQZ1 300 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 MMEL1Q495T6 779 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 RUNDC3AQ59EK9 446 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 PDSS1Q5T2R2 415 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 EEF1A1P5Q5VTE0 462 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 P4HA3Q7Z4N8 544 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 DHDDSQ86SQ9 333 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 MED12LQ86YW9 2145 aa12.63□□□□□ -0.39
LIMS1-201ENST00000332345 GRAMD2AQ8IUY3 354 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms