RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 RCBTB2O95199 551 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 DPP4P27487 766 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 DIO3P55073 304 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 SUMO3P55854 103 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 CLDN8P56748 225 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 CLDN18P56856 261 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 ABCE1P61221 599 aaKnown RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 LRRC74AQ0VAA2 488 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 HSPB3Q12988 150 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 EIPR1Q53HC9 387 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 ZNF385BQ569K4 471 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 OR2A2Q6IF42 318 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 FAM180BQ6P0A1 224 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 CDC73Q6P1J9 531 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 ZNF551Q7Z340 670 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 EXOC3L1Q86VI1 746 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 CCDC71Q8IV32 467 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 NUP43Q8NFH3 380 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 TOR1AIP2Q8NFQ8 470 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 OR4K17Q8NGC6 315 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 OR8J2Q8NGG1 315 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 CDC26Q8NHZ8 85 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 MIPOL1Q8TD10 442 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 FAM222BQ8WU58 562 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 RNASE6Q93091 150 aaKnown RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 KISS1RQ969F8 398 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 TESCQ96BS2 214 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 C1GALT1C1Q96EU7 318 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 TSSK3Q96PN8 268 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 PIGQQ9BRB3 760 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 BTBD2Q9BX70 525 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 HOXD1Q9GZZ0 328 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 PIGUQ9H490 435 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 SERHLQ9NQF3 203 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 UBQLN4Q9NRR5 601 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 SIRT3Q9NTG7 399 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 SH3BP4Q9P0V3 963 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 RABL2AQ9UBK7 228 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 ZDHHC2Q9UIJ5 367 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 DKKL1Q9UK85 242 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 EIF3LQ9Y262 564 aaKnown RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 SLC6A5Q9Y345 797 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 L3MBTL1Q9Y468 752 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 PTGDR2Q9Y5Y4 395 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 AP4B1Q9Y6B7 739 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 CACNA1CQ13936 2221 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 ZNF407Q9C0G0 2248 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 SPENQ96T58 3664 aaKnown RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 TRAV20A0A0B4J274 112 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 A0A1W2PRB8 838 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 A0A1W2PRQ8 180 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 NKX2-6A6NCS4 301 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 DUXAA6NLW8 204 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 FAM90A27PA6NNH2 459 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 TMEM233B4DJY2 109 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 SLCO1B7G3V0H7 640 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 H0Y3Z8 333 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 RNASET2O00584 256 aaKnown RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 ZNHIT1O43257 154 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 KCNK2O95069 426 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 UTS2O95399 124 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 ALOX5P09917 674 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 ACP2P11117 423 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 FCGR2AP12318 317 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 ELK4P28324 431 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 ARRB2P32121 409 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 GABRA3P34903 492 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 RPL14P50914 215 aaKnown RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 ZNF136P52737 540 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 CLNS1AP54105 237 aaKnown RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 B3GALT5-AS1P59052 145 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 POU6F2P78424 691 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 TLE4Q04727 773 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 GABPB1Q06547 395 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 DAZAP2Q15038 168 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 TMEM95Q3KNT9 176 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 GALNTL6Q49A17 601 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 FAM209AQ5JX71 171 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 DCST1Q5T197 706 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 CPTPQ5TA50 214 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 FAM219BQ5XKK7 198 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 ARSKQ6UWY0 536 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 LURAP1LQ8IV03 231 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 METTL25Q8N6Q8 603 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 FNDC5Q8NAU1 212 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 ZNF527Q8NB42 609 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 RELL2Q8NC24 303 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 CHDHQ8NE62 594 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 TNIP2Q8NFZ5 429 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 OR4N2Q8NGD1 307 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 PPP1R14CQ8TAE6 165 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 NINJ1Q92982 152 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 CIDECQ96AQ7 238 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 ZBTB8AQ96BR9 441 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 EFHD2Q96C19 240 aaPredicted RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 TUBGCP3Q96CW5 907 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 FAM120BQ96EK7 910 aaKnown RBP5.72□□□□□ -1.49
SMG1-201ENST00000330588 C3orf30Q96M34 536 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 SFXN2Q96NB2 322 aa5.72□□□□□ -1.49
SMG1-201ENST00000330588 TUBA1CQ9BQE3 449 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms