RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 UGT2B17O75795 530 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 FCGR2AP12318 317 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 CAPN3P20807 821 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 ELK4P28324 431 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 ADH6P28332 368 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 EIF1AXP47813 144 aaKnown RBP24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 HPCAP84074 193 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 NDUFAF6Q330K2 333 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 AP1ARQ63HQ0 302 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 MSANTD1Q6ZTZ1 278 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 TMCO5AQ8N6Q1 288 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 TOR1AIP2Q8NFQ8 470 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 OR5W2Q8NH69 310 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 FNDC9Q8TBE3 224 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 GPR119Q8TDV5 335 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 TCF7L2Q9NQB0 619 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 KCNE5Q9UJ90 142 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 PACSIN3Q9UKS6 424 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 GPC6Q9Y625 555 aaPredicted RBP24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 FBN2P35556 2912 aa24.84■■□□□ 1.57
ATPAF1-201ENST00000329231 CREBBPQ92793 2442 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 TNFSF12-TNFSF13A0A0A6YY99 330 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 HMGN4O00479 90 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 KIAA0513O60268 411 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 TNFSF13O75888 250 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 KRT75O95678 551 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 GSNP06396 782 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 CPA2P48052 419 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 POLR2JP52435 117 aaKnown RBP24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 FOXF1Q12946 379 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 SNTB1Q13884 538 aaKnown RBP24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 PDSS1Q5T2R2 415 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 TYW3Q6IPR3 259 aaKnown RBP24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 ESPNLQ6ZVH7 1005 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 EIF3MQ7L2H7 374 aaKnown RBP24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 OLIG3Q7RTU3 272 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 RFWD2Q8NHY2 731 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 ARSGQ96EG1 525 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 RBM24Q9BX46 236 aaKnown RBP24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 LAT2Q9GZY6 243 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 SAP130Q9H0E3 1048 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 RNF122Q9H9V4 155 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 LIPT1Q9Y234 373 aa24.83■■□□□ 1.57
ATPAF1-201ENST00000329231 MED12LQ86YW9 2145 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 ADAMDEC1O15204 470 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 CSTAP01040 98 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 CCR4P51679 360 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 STX1BP61266 288 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 FUT5Q11128 374 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 CBFBQ13951 182 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 GPAT3Q53EU6 434 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 LUZP2Q86TE4 346 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 LILRA2Q8N149 483 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 ZNF619Q8N2I2 560 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 CNEP1R1Q8N9A8 125 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 OR10D3Q8NH80 312 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 FBXO27Q8NI29 283 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 ITCHQ96J02 903 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 ADGRG7Q96K78 797 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 PRRG4Q9BZD6 226 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 TMEM185BQ9H7F4 350 aa24.82■■□□□ 1.56
ATPAF1-201ENST00000329231 FAM234BA2RU67 622 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 ANP32DO95626 131 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 OPN1LWP04000 364 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 MAGEA8P43361 318 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 IDH3AP50213 366 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 KRTAP10-9P60411 292 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 SORDQ00796 357 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 SKP2Q13309 424 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 FGFBP1Q14512 234 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 CTU2Q2VPK5 515 aaKnown RBP24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 FRRS1Q6ZNA5 592 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 ZZZ3Q8IYH5 903 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 OR9I1Q8NGQ6 314 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 OR2V1Q8NHB1 315 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 MRGPRX4Q96LA9 322 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 TRNT1Q96Q11 434 aaKnown RBP24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 CCDC28BQ9BUN5 200 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 CRIM1Q9NZV1 1036 aa24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 MCTS1Q9ULC4 181 aaKnown RBP24.81■■□□□ 1.56
ATPAF1-201ENST00000329231 DCHS2Q6V1P9 2916 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 CENPVL1A0A0U1RR11 272 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 TUBAL3A6NHL2 446 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 CYP7B1O75881 506 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 H6PDO95479 791 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 C1QCP02747 245 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 ZCCHC18P0CG32 403 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 PRKCAP17252 672 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 MRPL19P49406 292 aaKnown RBP24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 AQP5P55064 265 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 TOMM34Q15785 309 aaPredicted RBP24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 TIGD2Q4W5G0 525 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 PPP4R4Q6NUP7 873 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 DNAJC14Q6Y2X3 702 aaPredicted RBP24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 FAM222BQ8WU58 562 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 STARD4Q96DR4 205 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 KLHL15Q96M94 604 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 SLC35A3Q9Y2D2 325 aa24.8■■□□□ 1.56
ATPAF1-201ENST00000329231 A0A0J9YW62 118 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 PRAMEF27A3QJZ7 478 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms