RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 TRAM2Q15035 370 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 ATRAIDQ6UW56 229 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 ZNF761Q86XN6 746 aaPredicted RBP13.23□□□□□ -0.29
PABPC1-201ENST00000318607 SFTPA1Q8IWL2 248 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 PLA2G15Q8NCC3 412 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 OR52I2Q8NH67 350 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 NKD1Q969G9 470 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 UBQLN3Q9H347 655 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 SLCO1C1Q9NYB5 712 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 A0A1B0GVI7 797 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 PDCD5O14737 125 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 KLHL18O94889 574 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 MAS1P04201 325 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 C6P13671 934 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 EDNRAP25101 427 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 MPIP34949 423 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 ST3GAL3Q11203 375 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 TDGQ13569 410 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 HTR4Q13639 388 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 CRMP1Q14194 572 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 LRRC28Q86X40 367 aaPredicted RBP13.23□□□□□ -0.29
PABPC1-201ENST00000318607 SLC44A3Q8N4M1 653 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 FANK1Q8TC84 345 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 ZDHHC1Q8WTX9 485 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 CDS1Q92903 461 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 ZSWIM3Q96MP5 696 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 ADAT1Q9BUB4 502 aaKnown RBP13.23□□□□□ -0.29
PABPC1-201ENST00000318607 DLL4Q9NR61 685 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 RNF186Q9NXI6 227 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 PLEKHM1Q9Y4G2 1056 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 FKBP7Q9Y680 259 aa13.23□□□□□ -0.29
PABPC1-201ENST00000318607 AGAP14A8MT82 685 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 NDUFV2P19404 249 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 HSD3B2P26439 372 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 ERVK-21P61565 698 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 BTN3A2P78410 334 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 LIN54Q6MZP7 749 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 PRSS42Q7Z5A4 293 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 KCTD20Q7Z5Y7 419 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 LIX1LQ8IVB5 337 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 NUP43Q8NFH3 380 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 SGTBQ96EQ0 304 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 SLC41A3Q96GZ6 507 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 B3GNT4Q9C0J1 378 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 WDR26Q9H7D7 661 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 SIRT3Q9NTG7 399 aaPredicted RBP13.22□□□□□ -0.29
PABPC1-201ENST00000318607 PFDN2Q9UHV9 154 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 ELF5Q9UKW6 265 aaPredicted RBP13.22□□□□□ -0.29
PABPC1-201ENST00000318607 PATJQ8NI35 1801 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 TRBV2A0A0J9YWF9 115 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 LRRC72A6NJI9 287 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 NPC1O15118 1278 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 TPOP07202 933 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 LAMP2P13473 410 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 CCR4P51679 360 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 SRSF5Q13243 272 aaKnown RBP13.22□□□□□ -0.29
PABPC1-201ENST00000318607 CAMK2DQ13557 499 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 PGGHGQ32M88 737 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 C4orf46Q504U0 113 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 FNDC3BQ53EP0 1204 aaKnown RBP13.22□□□□□ -0.29
PABPC1-201ENST00000318607 CDKL4Q5MAI5 379 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 TMEM215Q68D42 235 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 SSX6Q7RTT6 188 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 OR5M1Q8NGP8 315 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 HAVCR2Q8TDQ0 301 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 C20orf85Q9H1P6 137 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 ZNF768Q9H5H4 540 aaKnown RBP13.22□□□□□ -0.29
PABPC1-201ENST00000318607 TMEM129A0AVI4 362 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 SLC19A2O60779 497 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 LPLP06858 475 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 HOXC8P31273 242 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 PLA1AQ53H76 456 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 PARS2Q7L3T8 475 aaKnown RBP13.22□□□□□ -0.29
PABPC1-201ENST00000318607 ZFP82Q8N141 532 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 OR52E2Q8NGJ4 325 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 GNPDA2Q8TDQ7 276 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 IGSF21Q96ID5 467 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 PRRC1Q96M27 445 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 PTCHD1Q96NR3 888 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 AMDHD1Q96NU7 426 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 KCNK15Q9H427 330 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 NEUROD4Q9HD90 331 aa13.22□□□□□ -0.29
PABPC1-201ENST00000318607 A0A1B0GTH9 108 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 A0A1W2PRQ8 180 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 FLRT2O43155 660 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 UGDHO60701 494 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 MTRF1O75570 445 aaKnown RBP13.21□□□□□ -0.29
PABPC1-201ENST00000318607 EPPINO95925 133 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 C8AP07357 584 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 IRS1P35568 1242 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 CCR8P51685 355 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 MFSD13AQ14CX5 517 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 HBMQ6B0K9 141 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 FIP1L1Q6UN15 594 aaKnown RBP13.21□□□□□ -0.29
PABPC1-201ENST00000318607 THSD4Q6ZMP0 1018 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 GATSQ8NAP1 163 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 OR4C6Q8NH72 309 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 FIBINQ8TAL6 211 aa13.21□□□□□ -0.29
PABPC1-201ENST00000318607 ZNF436Q9C0F3 470 aaPredicted RBP13.21□□□□□ -0.29
PABPC1-201ENST00000318607 FBXO34Q9NWN3 711 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms