RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ZNF234Q14588 700 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 GSG1Q2KHT4 349 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 RPL13AP3Q6NVV1 102 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 ASPGQ86U10 573 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 SLC44A3Q8N4M1 653 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 HDDC3Q8N4P3 179 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 MFSD9Q8NBP5 474 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 ZCCHC4Q9H5U6 513 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 NARFLQ9H6Q4 476 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 SNRNP200O75643 2136 aaKnown RBP17.73■□□□□ 0.43
RTN4-201ENST00000317610 FAM86C2PA6NEL3 165 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 RNGTTO60942 597 aaKnown RBP17.72■□□□□ 0.43
RTN4-201ENST00000317610 SBK2P0C263 348 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 UGT2B7P16662 529 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 CEBPBP17676 345 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 BMP7P18075 431 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 FUT1P19526 365 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 PTNP21246 168 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 GIFP27352 417 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 PITPNAQ00169 270 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 CAMK2DQ13557 499 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 GPR139Q6DWJ6 353 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 RANBP3LQ86VV4 465 aaPredicted RBP17.72■□□□□ 0.43
RTN4-201ENST00000317610 FBXL6Q8N531 539 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 OR2L3Q8NG85 312 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 C4orf36Q96KX1 117 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 CACNG6Q9BXT2 260 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 CACYBPQ9HB71 228 aaKnown RBP17.72■□□□□ 0.43
RTN4-201ENST00000317610 ADGRL4Q9HBW9 690 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 ABRACLQ9P1F3 81 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 NUP50Q9UKX7 468 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 TRAV1-2A0A0B4J238 106 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 IGLON5A6NGN9 336 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 PRR23D1E9PI22 279 aaPredicted RBP17.72■□□□□ 0.43
RTN4-201ENST00000317610 GPR171O14626 319 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 RCBTB2O95199 551 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 PDGFAP04085 211 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 CD3GP09693 182 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 PRR23D2P0DMB1 279 aaPredicted RBP17.72■□□□□ 0.43
RTN4-201ENST00000317610 IL9P15248 144 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 RAB3BP20337 219 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 SLC2A5P22732 501 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 HTR2AP28223 471 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 NRG3P56975 720 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 FOXK2Q01167 660 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 COL9A2Q14055 689 aaPredicted RBP17.72■□□□□ 0.43
RTN4-201ENST00000317610 ACSM3Q53FZ2 586 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 KLHL12Q53G59 568 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 GARNL3Q5VVW2 1013 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 BTN2A1Q7KYR7 527 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 FGD2Q7Z6J4 655 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 OR8H3Q8N146 312 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 PFN4Q8NHR9 129 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 TMEM239Q8WW34 195 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 ING5Q8WYH8 240 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 C20orf141Q9NUB4 165 aa17.72■□□□□ 0.43
RTN4-201ENST00000317610 CENPVL1A0A0U1RR11 272 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 C1QTNF3-AMACRE9PGA6 284 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 GSTZ1O43708 216 aaPredicted RBP17.71■□□□□ 0.43
RTN4-201ENST00000317610 RPS4Y1P22090 263 aaKnown RBP17.71■□□□□ 0.43
RTN4-201ENST00000317610 CLDN2P57739 230 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 DGCR2P98153 550 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 GAB4Q2WGN9 574 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 BAIAP2L2Q6UXY1 529 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 MS4A15Q8N5U1 240 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 SLC2A12Q8TD20 617 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 DEFB118Q96PH6 123 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 MFRPQ9BY79 579 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 TMEM168Q9H0V1 697 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 UCKL1Q9NWZ5 548 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 CLDND1Q9NY35 253 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 HAO2Q9NYQ3 351 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 NPTNQ9Y639 398 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 RPS10-NUDT3A0A1W2PQS6 291 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 CDHR4A6H8M9 788 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 OR5K3A6NET4 321 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 CTDSPLO15194 276 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 H2AFB2P0C5Z0 115 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 SAGP10523 405 aaPredicted RBP17.71■□□□□ 0.43
RTN4-201ENST00000317610 PEBP1P30086 187 aaKnown RBP17.71■□□□□ 0.43
RTN4-201ENST00000317610 HSF2Q03933 536 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 ST3GAL2Q16842 350 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 LGALSLQ3ZCW2 172 aaPredicted RBP17.71■□□□□ 0.43
RTN4-201ENST00000317610 THSD4Q6ZMP0 1018 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 TMPRSS11FQ6ZWK6 438 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 CDH24Q86UP0 819 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 OR2L13Q8N349 312 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 OR52E1Q8NGJ3 308 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 ST6GALNAC2Q9UJ37 374 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 TMEM5Q9Y2B1 443 aa17.71■□□□□ 0.43
RTN4-201ENST00000317610 TRPM6Q9BX84 2022 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 LOC105369274A0A096LPK9 316 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 PRG2P13727 222 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 ATF1P18846 271 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 RIPPLY1Q0D2K3 151 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 DYRK1AQ13627 763 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 KLF9Q13886 244 aaPredicted RBP17.7■□□□□ 0.42
RTN4-201ENST00000317610 ZNF425Q6IV72 752 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 OR4N4Q8N0Y3 316 aa17.7■□□□□ 0.42
RTN4-201ENST00000317610 ZNF687Q8N1G0 1237 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms