RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PRAMEF10O60809 474 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 TMEM63AO94886 807 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SIX3O95343 332 aaPredicted RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 YES1P07947 543 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SLC35E2BP0CK96 405 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 HSD17B1P14061 328 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 IDUAP35475 653 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 OR7E24Q6IFN5 339 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 PSAPL1Q6NUJ1 521 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 GJC3Q8NFK1 279 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SPPL3Q8TCT6 385 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 AGAP11Q8TF27 550 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 PRR11Q96HE9 360 aaPredicted RBP3□□□□□ -1.93
CLOCK-201ENST00000309964 SLC46A2Q9BY10 475 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 GPR87Q9BY21 358 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 DUSP22Q9NRW4 184 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 TM7SF3Q9NS93 570 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 SNTG1Q9NSN8 517 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 C14orf119Q9NWQ9 140 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 WBP1LQ9NX94 342 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 ZDHHC2Q9UIJ5 367 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 ALPK2Q86TB3 2170 aa3□□□□□ -1.93
CLOCK-201ENST00000309964 LILRA5A6NI73 299 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 UNC119BA6NIH7 251 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 WTIPA6NIX2 430 aaPredicted RBP2.99□□□□□ -1.93
CLOCK-201ENST00000309964 E7ENX8 843 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 PLRG1O43660 514 aaKnown RBP2.99□□□□□ -1.93
CLOCK-201ENST00000309964 THBS1P07996 1170 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 SLC35E2P0CK97 266 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 OSMP13725 252 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 CEBPBP17676 345 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 RAB3AP20336 220 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 PRKXP51817 358 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 SUB1P53999 127 aaKnown RBP eCLIP2.99□□□□□ -1.93
CLOCK-201ENST00000309964 NKPD1Q17RQ9 610 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 ERMP1Q7Z2K6 904 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 CHERPQ8IWX8 916 aaKnown RBP2.99□□□□□ -1.93
CLOCK-201ENST00000309964 SLC15A4Q8N697 577 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 TCEANCQ8N8B7 351 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 SCAMP4Q969E2 229 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 FAM46BQ96A09 425 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 CDK15Q96Q40 435 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 NICN1Q9BSH3 213 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 DCSTAMPQ9H295 470 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 ZNF442Q9H7R0 627 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 SIAEQ9HAT2 523 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 SDR39U1Q9NRG7 319 aaPredicted RBP2.99□□□□□ -1.93
CLOCK-201ENST00000309964 RLIMQ9NVW2 624 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 CBLCQ9ULV8 474 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 CHD3Q12873 2000 aaKnown RBP2.99□□□□□ -1.93
CLOCK-201ENST00000309964 TMEM212A6NML5 194 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 ADAM23O75077 832 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 PAHP00439 452 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 POU2F1P14859 743 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 HNF1AP20823 631 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 PTGER4P35408 488 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 MAP2K3P46734 347 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 GRB2P62993 217 aaKnown RBP2.99□□□□□ -1.93
CLOCK-201ENST00000309964 OGDHQ02218 1023 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 PRKCDQ05655 676 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 NPRL3Q12980 569 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 ATP6AP1Q15904 470 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 CDKN3Q16667 212 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 ZNF181Q2M3W8 571 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 LRIT3Q3SXY7 679 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 NKAIN1Q4KMZ8 207 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 ZNF684Q5T5D7 378 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 FAM69AQ5T7M9 428 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 CES4AQ5XG92 561 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 FCRL6Q6DN72 434 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 KIAA1211LQ6NV74 962 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 BEND4Q6ZU67 534 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 TECPR1Q7Z6L1 1165 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 APCDD1Q8J025 514 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 DCBLD1Q8N8Z6 715 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 POGLUT1Q8NBL1 392 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 OR6T1Q8NGN1 323 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 OR4K15Q8NH41 348 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 PSMF1Q92530 271 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 FUBP1Q96AE4 644 aaKnown RBP2.99□□□□□ -1.93
CLOCK-201ENST00000309964 ISOC1Q96CN7 298 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 MOCOSQ96EN8 888 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 LINC00615Q96LM1 132 aaPredicted RBP2.99□□□□□ -1.93
CLOCK-201ENST00000309964 HHIPQ96QV1 700 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 ZNF471Q9BX82 626 aaPredicted RBP2.99□□□□□ -1.93
CLOCK-201ENST00000309964 PLK3Q9H4B4 646 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 SLC22A11Q9NSA0 550 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 ARMC1Q9NVT9 282 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 MUTYHQ9UIF7 546 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 SDK2Q58EX2 2172 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 IGLV3-10A0A075B6K4 115 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 TRAV17A0A0B4J275 112 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 ANKRD33BA6NCL7 494 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 ZNF850A8MQ14 1090 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 TRAPPC2LH3BP13 241 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 DVL2O14641 736 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 XPNPEP2O43895 674 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 HOXC4P09017 264 aaPredicted RBP2.99□□□□□ -1.93
CLOCK-201ENST00000309964 NAGAP17050 411 aa2.99□□□□□ -1.93
CLOCK-201ENST00000309964 AMY2BP19961 511 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms