RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SIGIRRQ6IA17 410 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 MSANTD1Q6ZTZ1 278 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 TNFAIP8L1Q8WVP5 186 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 ELSPBP1Q96BH3 223 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 DERL3Q96Q80 235 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 OR14A2Q96R54 314 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 CD180Q99467 661 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 OR52D1Q9H346 318 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 FKRPQ9H9S5 495 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 H7C1C5 153 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 PEX12O00623 359 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 FZD7O75084 574 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 ADH1CP00326 375 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 PDGFAP04085 211 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 ENPP1P22413 925 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 LCN6P62502 163 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 GET4Q7L5D6 327 aaPredicted RBP13.58□□□□□ -0.24
PTPN9-201ENST00000306726 ADIPOR2Q86V24 386 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 SLC44A3Q8N4M1 653 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 FAM174AQ8TBP5 190 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 ZFAND1Q8TCF1 268 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 GHSRQ92847 366 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 KCTD12Q96CX2 325 aaKnown RBP13.58□□□□□ -0.24
PTPN9-201ENST00000306726 ASB16Q96NS5 453 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 BTBD1Q9H0C5 482 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 DIMT1Q9UNQ2 313 aaKnown RBP13.58□□□□□ -0.24
PTPN9-201ENST00000306726 DOCK9Q9BZ29 2069 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 RIIAD1A6NNX1 92 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 SLC16A5O15375 505 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 ZNF30P17039 623 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 NPR2P20594 1047 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 MPIP34949 423 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 ETV6P41212 452 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 PITPNBP48739 271 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 EVX1P49640 407 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 CRMP1Q14194 572 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 TBC1D19Q8N5T2 526 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 LCN9Q8WX39 176 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 FGF13Q92913 245 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 AMDHD1Q96NU7 426 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 OR7D2Q96RA2 312 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 ATF6BQ99941 703 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 NDC1Q9BTX1 674 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 UBE2ZQ9H832 354 aaPredicted RBP13.58□□□□□ -0.24
PTPN9-201ENST00000306726 FKBP7Q9Y680 259 aa13.58□□□□□ -0.24
PTPN9-201ENST00000306726 TRIOO75962 3097 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 IMPA2O14732 288 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 LINC01565O15544 149 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 RFPL3O75679 317 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 SEMG1P04279 462 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 NDUFV2P19404 249 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 HSD3B2P26439 372 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 HDDC2Q7Z4H3 204 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 OR52B4Q8NGK2 314 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 ZDHHC5Q9C0B5 715 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 KCNN2Q9H2S1 579 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 TMEM38AQ9H6F2 299 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 POLHQ9Y253 713 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 PRRT4C9JH25 899 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 L7N2F9 121 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 ERV3-1Q14264 604 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 ELP2Q6IA86 826 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 GPR155Q7Z3F1 870 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 OAFQ86UD1 273 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 ZNF547Q8IVP9 402 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 PGBD3Q8N328 593 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 ZNF680Q8NEM1 530 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 ARRDC3Q96B67 414 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 TSSK2Q96PF2 358 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 ARL6Q9H0F7 186 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 TRIM36Q9NQ86 728 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 C20orf141Q9NUB4 165 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 ACOXLQ9NUZ1 547 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 SPHK1Q9NYA1 384 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 ATXN7L1Q9ULK2 861 aaPredicted RBP13.57□□□□□ -0.24
PTPN9-201ENST00000306726 HS3ST2Q9Y278 367 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 TRBV2A0A0J9YWF9 115 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 A0A1W2PR48 441 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 SCO2O43819 266 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 AIFM1O95831 613 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 ANXA7P20073 488 aaKnown RBP13.57□□□□□ -0.24
PTPN9-201ENST00000306726 TEAD1P28347 426 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 DCUN1D3Q8IWE4 304 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 RDH10Q8IZV5 341 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 RPLP0P6Q8NHW5 317 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 HLA-CQ95604 372 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 NEURL3Q96EH8 262 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 HYLS1Q96M11 299 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 SIGLEC11Q96RL6 698 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 CDX2Q99626 313 aaPredicted RBP13.57□□□□□ -0.24
PTPN9-201ENST00000306726 RPS6KB2Q9UBS0 482 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 ING1Q9UK53 422 aaPredicted RBP13.57□□□□□ -0.24
PTPN9-201ENST00000306726 COPS3Q9UNS2 423 aa13.57□□□□□ -0.24
PTPN9-201ENST00000306726 TVP23AA6NH52 213 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 QSOX1O00391 747 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 SOX1O00570 391 aaPredicted RBP13.56□□□□□ -0.24
PTPN9-201ENST00000306726 OR10H2O60403 315 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 TYRP1P17643 537 aa13.56□□□□□ -0.24
PTPN9-201ENST00000306726 LCN1P31025 176 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms