RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 PFDN5Q99471 154 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 FAM117AQ9C073 453 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ZBTB20Q9HC78 741 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 COQ3Q9NZJ6 369 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 CXXC1Q9P0U4 656 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 LOC100130705A0A1B0GUX0 176 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 TVP23AA6NH52 213 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF891A8MT65 544 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SERPINE2P07093 398 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 CD82P27701 267 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SOX2P48431 317 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 TAS2R20P59543 309 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 CYCSP99999 105 aaKnown RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 PRAMEF8Q5VWM4 474 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 PRAMEF7Q5VXH5 474 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 KIAA1614Q5VZ46 1190 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 AWAT2Q6E213 333 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF695Q8IW36 515 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 HSH2DQ96JZ2 352 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 LRFN1Q9P244 771 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 TCRBV7S3A2A0A539 114 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 GLOD5A6NK44 160 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 J3QRK9 145 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 PAX7P23759 505 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF136P52737 540 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 CDKN3Q16667 212 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 C3orf38Q5JPI3 329 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SLX4IPQ5VYV7 408 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 LAIR1Q6GTX8 287 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 RTL6Q6ICC9 239 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF355PQ9NSJ1 428 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 FBXO7Q9Y3I1 522 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 GBF1Q92538 1859 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 TP53BP1Q12888 1972 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 OR6C65A6NJZ3 312 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 A8MVM7 634 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 F5H0A9 414 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 UBFD1O14562 309 aaKnown RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SCAMP2O15127 329 aaKnown RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 PLRG1O43660 514 aaKnown RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SLC35E2BP0CK96 405 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 CPT2P23786 658 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF423Q2M1K9 1284 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ASTLQ6HA08 431 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 TMPRSS12Q86WS5 348 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 NLGN4YQ8NFZ3 816 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SLC30A2Q9BRI3 323 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 WACQ9BTA9 647 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 NT5DC2Q9H857 520 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 DOPEY2Q9Y3R5 2298 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 RNF212BA8MTL3 300 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SDC3O75056 442 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 OLFM2O95897 454 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ALDH3B2P48448 385 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 CX3CR1P49238 355 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 HTD2P86397 168 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 CTBSQ01459 385 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 LARP4Q71RC2 724 aaKnown RBP eCLIP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 TSPAN33Q86UF1 283 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 C1orf210Q8IVY1 113 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 TMEFF1Q8IYR6 380 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 OR52E1Q8NGJ3 308 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 DOHHQ9BU89 302 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 CAMK2AQ9UQM7 478 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 CREG1O75629 220 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 SLCO2B1O94956 709 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 CD53P19397 219 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 KIR2DL3P43628 341 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 DEFB133Q30KQ1 61 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 CCNJQ5T5M9 372 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 COMMD6Q7Z4G1 85 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 MFSD9Q8NBP5 474 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 LSM14AQ8ND56 463 aaKnown RBP7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 FUBP1Q96AE4 644 aaKnown RBP7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 PEX11GQ96HA9 241 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 DMRTB1Q96MA1 342 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 DHRS4Q9BTZ2 278 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 BTBD2Q9BX70 525 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 PRELID1Q9Y255 219 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 H0YIG0 161 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 FMO6PO60774 539 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 G6PDP11413 515 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 IL11RAQ14626 422 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 TMEM196Q5HYL7 178 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 PAQR9Q6ZVX9 377 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 KIF18BQ86Y91 864 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 L3MBTL4Q8NA19 623 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 FAM210AQ96ND0 272 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 SLC46A1Q96NT5 459 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 LYRM4Q9HD34 91 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 MYOTQ9UBF9 498 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 TRBV2A0A0J9YWF9 115 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 LILRA5A6NI73 299 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 AURKAO14965 403 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 SLC9A3P48764 834 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 OR51G2Q8NGK0 314 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 LRCH3Q96II8 777 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 MRGPRX1Q96LB2 322 aa7.82□□□□□ -1.16
PCDHB1-201ENST00000306549 PWWP2AQ96N64 755 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms