RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 OR52P1PQ8NH57 321 aa24.35■■□□□ 1.49
SSU72-201ENST00000291386 NFKBIDQ8NI38 313 aa24.35■■□□□ 1.49
SSU72-201ENST00000291386 PHF10Q8WUB8 498 aaKnown RBP24.35■■□□□ 1.49
SSU72-201ENST00000291386 WDYHV1Q96HA8 205 aa24.35■■□□□ 1.49
SSU72-201ENST00000291386 LRRC37BQ96QE4 947 aa24.35■■□□□ 1.49
SSU72-201ENST00000291386 KLHDC3Q9BQ90 382 aa24.35■■□□□ 1.49
SSU72-201ENST00000291386 VKORC1Q9BQB6 163 aa24.35■■□□□ 1.49
SSU72-201ENST00000291386 SLC39A3Q9BRY0 314 aa24.35■■□□□ 1.49
SSU72-201ENST00000291386 SPATA9Q9BWV2 254 aa24.35■■□□□ 1.49
SSU72-201ENST00000291386 TRIM8Q9BZR9 551 aa24.35■■□□□ 1.49
SSU72-201ENST00000291386 EFCAB1Q9HAE3 211 aa24.35■■□□□ 1.49
SSU72-201ENST00000291386 VDAC3Q9Y277 283 aa24.35■■□□□ 1.49
SSU72-201ENST00000291386 IFT52Q9Y366 437 aa24.35■■□□□ 1.49
SSU72-201ENST00000291386 OR2M5A3KFT3 312 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 FIGNL2A6NMB9 653 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 AHRRA9YTQ3 701 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 FAM47E-STBD1D6RA91 191 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 ETV2O00321 342 aaPredicted RBP24.34■■□□□ 1.49
SSU72-201ENST00000291386 GMFGO60234 142 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 GABRA1P14867 456 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 SLC6A2P23975 617 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 PTGER4P35408 488 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 CBFBQ13951 182 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 SCARB2Q14108 478 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 LIN52Q52LA3 116 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 DCST1Q5T197 706 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 RAET1LQ5VY80 246 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 MTFR2Q6P444 385 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 HACD2Q6Y1H2 254 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 HMGN2P46Q86SG4 172 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 FJX1Q86VR8 437 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 OR5M9Q8NGP3 310 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 DMRTA2Q96SC8 542 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 GPATCH1Q9BRR8 931 aaKnown RBP24.34■■□□□ 1.49
SSU72-201ENST00000291386 SH3BGRL2Q9UJC5 107 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 MED12Q93074 2177 aa24.34■■□□□ 1.49
SSU72-201ENST00000291386 WIPF3A6NGB9 483 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 CLDN24A6NM45 220 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 UBTFL6P0CB48 400 aaPredicted RBP24.33■■□□□ 1.49
SSU72-201ENST00000291386 PSMA4P25789 261 aaKnown RBP24.33■■□□□ 1.49
SSU72-201ENST00000291386 ADH6P28332 368 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 EIF1P41567 113 aaKnown RBP24.33■■□□□ 1.49
SSU72-201ENST00000291386 LHX2P50458 406 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 PER3P56645 1201 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 CYP51A1Q16850 503 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 RABL3Q5HYI8 236 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 RNF220Q5VTB9 566 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 MYO7BQ6PIF6 2116 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 CALHM3Q86XJ0 350 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 GRAMD2AQ8IUY3 354 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 ULK2Q8IYT8 1036 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 C11orf65Q8NCR3 313 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 HIPK4Q8NE63 616 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 OR10A6Q8NH74 314 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 DNAJB12Q9NXW2 375 aaKnown RBP24.33■■□□□ 1.49
SSU72-201ENST00000291386 PRDM4Q9UKN5 801 aa24.33■■□□□ 1.49
SSU72-201ENST00000291386 GPC6Q9Y625 555 aaPredicted RBP24.33■■□□□ 1.49
SSU72-201ENST00000291386 AIM2O14862 343 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 BCAS1O75363 584 aaPredicted RBP24.32■■□□□ 1.48
SSU72-201ENST00000291386 AGFG2O95081 481 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 PABPC4LP0CB38 370 aaKnown RBP24.32■■□□□ 1.48
SSU72-201ENST00000291386 PEPDP12955 493 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 ZNF708P17019 499 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 ACVR2AP27037 513 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 EEF1A1P68104 462 aaKnown RBP24.32■■□□□ 1.48
SSU72-201ENST00000291386 LARS2Q15031 903 aaKnown RBP24.32■■□□□ 1.48
SSU72-201ENST00000291386 SLC25A53Q5H9E4 307 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 C8orf82Q6P1X6 216 aaPredicted RBP24.32■■□□□ 1.48
SSU72-201ENST00000291386 ZNF585AQ6P3V2 769 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 ARPINQ7Z6K5 226 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 VRK2Q86Y07 508 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 SLC30A8Q8IWU4 369 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 ZZZ3Q8IYH5 903 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 POC1BQ8TC44 478 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 HOPXQ9BPY8 73 aaPredicted RBP24.32■■□□□ 1.48
SSU72-201ENST00000291386 ZNF232Q9UNY5 417 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 ANGPT4Q9Y264 503 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 ZNF443Q9Y2A4 671 aaPredicted RBP24.32■■□□□ 1.48
SSU72-201ENST00000291386 ZNF337Q9Y3M9 751 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 AP4B1Q9Y6B7 739 aa24.32■■□□□ 1.48
SSU72-201ENST00000291386 PHF3Q92576 2039 aaKnown RBP24.32■■□□□ 1.48
SSU72-201ENST00000291386 CDHR4A6H8M9 788 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 NUDT14O95848 222 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 LDLRP01130 860 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 ESRRAP11474 423 aaPredicted RBP24.31■■□□□ 1.48
SSU72-201ENST00000291386 STARP49675 285 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 DLX5P56178 289 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 CLDN18P56856 261 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 SF3B4Q15427 424 aaKnown RBP eCLIP24.31■■□□□ 1.481e-6■■■■■ 26.9
SSU72-201ENST00000291386 MRPL2Q5T653 305 aaKnown RBP24.31■■□□□ 1.48
SSU72-201ENST00000291386 TMEM211Q6ICI0 200 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 ZNF836Q6ZNA1 936 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 TMCO5AQ8N6Q1 288 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 CCDC197Q8NCU1 140 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 CNOT9Q92600 299 aaKnown RBP24.31■■□□□ 1.48
SSU72-201ENST00000291386 ECSITQ9BQ95 431 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 CACYBPQ9HB71 228 aaKnown RBP24.31■■□□□ 1.48
SSU72-201ENST00000291386 AP3M1Q9Y2T2 418 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 FAM215AQ9Y5M1 114 aa24.31■■□□□ 1.48
SSU72-201ENST00000291386 USP9XQ93008 2570 aaPredicted RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms