RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 MTSS1LQ765P7 747 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 TPRA1Q86W33 373 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 OR4N5Q8IXE1 308 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 LRRC25Q8N386 305 aaPredicted RBP12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 MFSD9Q8NBP5 474 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 C7orf57Q8NEG2 295 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 OR11H4Q8NGC9 324 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 OR13C2Q8NGS9 318 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 POF1BQ8WVV4 589 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 C10orf90Q96M02 699 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 IFT27Q9BW83 186 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 OR51J1Q9H342 316 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 EMC7Q9NPA0 242 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 DIABLOQ9NR28 239 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 CLDND1Q9NY35 253 aa12.29□□□□□ -0.44
SLC28A1-201ENST00000286749 LOC105369274A0A096LPK9 316 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 A0A0B4J203 849 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 TEX13CA0A0J9YWL9 993 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 TBC1D3BA6NDS4 549 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 MID1O15344 667 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 FKTNO75072 461 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 PAK4O96013 591 aaPredicted RBP12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 TCRBP04435 133 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 SYPP08247 313 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 CCL5P13501 91 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 IL9P15248 144 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 GIFP27352 417 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 OR12D2P58182 307 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 OR4N4Q8N0Y3 316 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 LNX2Q8N448 690 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 TMEM239Q8WW34 195 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 TEAD3Q99594 435 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 TTTY10Q9BZA0 68 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 LYARQ9NX58 379 aaKnown RBP12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 MAT2BQ9NZL9 334 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 CHD7Q9P2D1 2997 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 CDHR4A6H8M9 788 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 FAM86C2PA6NEL3 165 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 ZNF888P0CJ79 500 aaPredicted RBP12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 ANXA3P12429 323 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 DGCR2P98153 550 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 FOXK2Q01167 660 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 OR1Q1Q15612 314 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 ARHGAP11BQ3KRB8 267 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 EIPR1Q53HC9 387 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 AGBL4Q5VU57 503 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 SIAH3Q8IW03 269 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 TOMM5Q8N4H5 51 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 CYB561A3Q8NBI2 242 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 ZFP3Q96NJ6 502 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 SDF2Q99470 211 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 RANBP3Q9H6Z4 567 aaPredicted RBP12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 CMC2Q9NRP2 79 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 ELF5Q9UKW6 265 aaPredicted RBP12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 MRPS7Q9Y2R9 242 aaKnown RBP12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 NUBP2Q9Y5Y2 271 aa12.28□□□□□ -0.44
SLC28A1-201ENST00000286749 TBC1D3KA0A087X1G2 549 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 NPIPA5A0A0B4J1W7 369 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 A0A1W2PPK0 400 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 A0A1W2PRG6 482 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 TBC1D3FA6NER0 549 aaPredicted RBP12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 PRR23AA6NEV1 266 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 SLC22A31A6NKX4 558 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 NPIPA7E9PJI5 369 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 BTN3A3O00478 584 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 NPIPA8P0DM63 369 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 CMPK1P30085 196 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 CTNNB1P35222 781 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 WASP42768 502 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 CCR6P51684 374 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 ZNF85Q03923 595 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 ACSM3Q53FZ2 586 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 SMUG1Q53HV7 270 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 TBC1D3GQ6DHY5 549 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 TEX261Q6UWH6 196 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 PXKQ7Z7A4 578 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 GPALPP1Q8IXQ4 340 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 OR5J2Q8NH18 312 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 YIPF5Q969M3 257 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 MAP6Q96JE9 813 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 PGLYRP3Q96LB9 341 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 ADGRL4Q9HBW9 690 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 MRPL39Q9NYK5 338 aaKnown RBP12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 SERGEFQ9UGK8 458 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 FBXL4Q9UKA2 621 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 U3KQ87 197 aa12.27□□□□□ -0.44
SLC28A1-201ENST00000286749 TRAV27A0A087WT01 109 aa12.27□□□□□ -0.45
SLC28A1-201ENST00000286749 RNGTTO60942 597 aaKnown RBP12.27□□□□□ -0.45
SLC28A1-201ENST00000286749 SLC22A5O76082 557 aa12.27□□□□□ -0.45
SLC28A1-201ENST00000286749 AGR2O95994 175 aa12.27□□□□□ -0.45
SLC28A1-201ENST00000286749 GYPBP06028 91 aa12.27□□□□□ -0.45
SLC28A1-201ENST00000286749 HNRNPA1P09651 372 aaKnown RBP eCLIP12.27□□□□□ -0.45
SLC28A1-201ENST00000286749 SBK2P0C263 348 aa12.27□□□□□ -0.45
SLC28A1-201ENST00000286749 SAGP10523 405 aaPredicted RBP12.27□□□□□ -0.45
SLC28A1-201ENST00000286749 SNRPBP14678 240 aaKnown RBP12.27□□□□□ -0.45
SLC28A1-201ENST00000286749 RAB3BP20337 219 aa12.27□□□□□ -0.45
SLC28A1-201ENST00000286749 HOXD11P31277 338 aaPredicted RBP12.27□□□□□ -0.45
SLC28A1-201ENST00000286749 PYCR1P32322 319 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms