RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 METTL7AQ9H8H3 244 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 ACER3Q9NUN7 267 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 ANKRD10Q9NXR5 420 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 GPR83Q9NYM4 423 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 USE1Q9NZ43 259 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 KLRF1Q9NZS2 232 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 TESQ9UGI8 421 aaKnown RBP17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 DOCK10Q96BY6 2186 aa17.29■□□□□ 0.36
PDLIM3-202ENST00000284770 CDK2AP1O14519 115 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 EIF4E2O60573 245 aaKnown RBP17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 ADAM11O75078 769 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 HPRP00739 348 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 PRKACGP22612 351 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 PTGDSP41222 190 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 LIMS1P48059 325 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 HMGA2P52926 109 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 SPIBQ01892 262 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 ZNF117Q03924 483 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 C17orf67Q0P5P2 114 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 GANABQ14697 944 aaKnown RBP17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 LAPTM4AQ15012 233 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 NHSL2Q5HYW2 709 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 ENTPD8Q5MY95 495 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 SLC22A10Q63ZE4 541 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 BICRALQ6AI39 1079 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 RTL4Q6ZR62 310 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 TSPYL5Q86VY4 417 aaPredicted RBP17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 APLFQ8IW19 511 aaPredicted RBP17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 CYP4Z2PQ8N1L4 340 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 DUSP19Q8WTR2 217 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 NR4A3Q92570 626 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 DHRS1Q96LJ7 313 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 NMNAT1Q9HAN9 279 aaPredicted RBP17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 GALNT9Q9HCQ5 603 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 RAB26Q9ULW5 256 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 KCNMB2Q9Y691 235 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 OIP5O43482 229 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 HCRTR2O43614 444 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 CCL11P51671 97 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 CDH12P55289 794 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 TAS2R41P59536 307 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 EPS8Q12929 822 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 RAPSNQ13702 412 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 ANKRD34AQ69YU3 496 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 ISLR2Q6UXK2 745 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 LINC00696Q6ZRV3 163 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 ADAMTS16Q8TE57 1224 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 RBM4BQ9BQ04 359 aaKnown RBP17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 ZNF559Q9BR84 538 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 RBM4Q9BWF3 364 aaKnown RBP17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 POLR2J2Q9GZM3 115 aaKnown RBP17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 POLR2J3Q9H1A7 115 aaKnown RBP17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 SMURF2Q9HAU4 748 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 SDHAF3Q9NRP4 125 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 CNIH4Q9P003 139 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 RHCGQ9UBD6 479 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 LRCH1Q9Y2L9 728 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 AP4B1Q9Y6B7 739 aa17.28■□□□□ 0.36
PDLIM3-202ENST00000284770 CEP295Q9C0D2 2601 aa17.27■□□□□ 0.36
PDLIM3-202ENST00000284770 CPSF4LA6NMK7 179 aaKnown RBP17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 TNFRSF11BO00300 401 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 CCL3P10147 92 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 HTR2AP28223 471 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 IFNA8P32881 189 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 CD96P40200 585 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 ARHGDIAP52565 204 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 OC90Q02509 493 aaPredicted RBP17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 SLC30A6Q6NXT4 461 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 MDGA2Q7Z553 956 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 SH3YL1Q96HL8 342 aaPredicted RBP17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 UTP23Q9BRU9 249 aaKnown RBP17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 OSBPL11Q9BXB4 747 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 ZNF552Q9H707 407 aaPredicted RBP17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 CPNE5Q9HCH3 593 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 CTPS2Q9NRF8 586 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 SMPD3Q9NY59 655 aaPredicted RBP17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 ICAM5Q9UMF0 924 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 NTNG1Q9Y2I2 539 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 WIF1Q9Y5W5 379 aa17.27■□□□□ 0.35
PDLIM3-202ENST00000284770 MED13Q9UHV7 2174 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 ZFHX4Q86UP3 3567 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 ANKRD33BA6NCL7 494 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 C2orf72A6NCS6 295 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 C17orf51A8MQB3 221 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 GADD45GO95257 159 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 WDPCPO95876 746 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 LINGO3P0C6S8 592 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 RYKP34925 604 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 CASRP41180 1078 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 SMIM11AP58511 58 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 TUBA3CQ13748 450 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 GK3PQ14409 553 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 OR1Q1Q15612 314 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 COLEC12Q5KU26 742 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 C6orf52Q5T4I8 152 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 TUBA3EQ6PEY2 450 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 PLEKHM3Q6ZWE6 761 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 ZNF227Q86WZ6 799 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 TMCO5AQ8N6Q1 288 aa17.26■□□□□ 0.35
PDLIM3-202ENST00000284770 LSMEM1Q8N8F7 131 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms