RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 HMCESQ96FZ2 354 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 ABHD8Q96I13 439 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 NSMCE3Q96MG7 304 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 NDNQ99608 321 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 TMEM246Q9BRR3 403 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 GOLPH3Q9H4A6 298 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 NUDT15Q9NV35 164 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 PISDQ9UG56 409 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 KCNG2Q9UJ96 466 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 TINAGQ9UJW2 476 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 CHST2Q9Y4C5 530 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 GOLGA8JA6NMD2 632 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 E7ESA3 106 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 F8VZ95 297 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 GLAP06280 429 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 GIMD1P0DJR0 217 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 GPX3P22352 226 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 PLA2G5P39877 138 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 DUSP3P51452 185 aaPredicted RBP2.49□□□□□ -2.01
CHD1-201ENST00000284049 PPIAP62937 165 aaKnown RBP2.49□□□□□ -2.01
CHD1-201ENST00000284049 MRPS6P82932 125 aaKnown RBP2.49□□□□□ -2.01
CHD1-201ENST00000284049 MESP2Q0VG99 397 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 RBM39Q14498 530 aaKnown RBP2.49□□□□□ -2.01
CHD1-201ENST00000284049 VAMP3Q15836 100 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 SSX6Q7RTT6 188 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 CPEB2Q7Z5Q1 589 aaKnown RBP2.49□□□□□ -2.01
CHD1-201ENST00000284049 CTU1Q7Z7A3 348 aaKnown RBP2.49□□□□□ -2.01
CHD1-201ENST00000284049 SERINC5Q86VE9 423 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 VRK2Q86Y07 508 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 LNX2Q8N448 690 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 GLYATL2Q8WU03 294 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 PHF10Q8WUB8 498 aaKnown RBP2.49□□□□□ -2.01
CHD1-201ENST00000284049 TCTEX1D2Q8WW35 142 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 LPAR4Q99677 370 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 NT5MQ9NPB1 228 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 MSRB1Q9NZV6 116 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 ADAM21Q9UKJ8 722 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 PACSIN3Q9UKS6 424 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 B9D1Q9UPM9 204 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 FER1L5A0AVI2 2057 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 COL11A2P13942 1736 aaPredicted RBP2.49□□□□□ -2.01
CHD1-201ENST00000284049 A0A1B0GUH1 482 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 SIRPB1O00241 398 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 GOSR2O14653 212 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 TOR1AO14656 332 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 MSH4O15457 936 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 OR1F1O43749 312 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 FCMRO60667 390 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 MMP1P03956 469 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 CD1DP15813 335 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 MMP11P24347 488 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 PCSK6P29122 969 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 CLDN20P56880 219 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 UBE2KP61086 200 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 APLFQ8IW19 511 aaPredicted RBP2.49□□□□□ -2.01
CHD1-201ENST00000284049 CD302Q8IX05 232 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 PGBD5Q8N414 524 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 ING5Q8WYH8 240 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 ANKRD7Q92527 254 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.49□□□□□ -2.01
CHD1-201ENST00000284049 SLC25A28Q96A46 364 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 UPRTQ96BW1 309 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 SLC41A3Q96GZ6 507 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 PCED1BQ96HM7 432 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 FOXN4Q96NZ1 517 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 RBBP8Q99708 897 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 BTBD10Q9BSF8 475 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 CHID1Q9BWS9 393 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 TRIM9Q9C026 710 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 GBA3Q9H227 469 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 MIS18AQ9NYP9 233 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 ZNF639Q9UID6 485 aa2.49□□□□□ -2.01
CHD1-201ENST00000284049 SSC5DA1L4H1 1573 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 LRRC30A6NM36 301 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 FCN1O00602 326 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 MSTNO14793 375 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 RNASEH1O60930 286 aaKnown RBP2.48□□□□□ -2.01
CHD1-201ENST00000284049 WDR1O75083 606 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 CDK14O94921 469 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 MED26O95402 600 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 TFAP2AP05549 437 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 OCM2P0CE71 109 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 OCMP0CE72 109 aaPredicted RBP2.48□□□□□ -2.01
CHD1-201ENST00000284049 EGR2P11161 476 aaPredicted RBP2.48□□□□□ -2.01
CHD1-201ENST00000284049 ATP6V1B2P21281 511 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 FASP25445 335 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 GABRR2P28476 465 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 TSPAN5P62079 268 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 REEP3Q6NUK4 255 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 RANBP3LQ86VV4 465 aaPredicted RBP2.48□□□□□ -2.01
CHD1-201ENST00000284049 FUNDC1Q8IVP5 155 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 ODF3L1Q8IXM7 274 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 FAM89BQ8N5H3 189 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 FBXO36Q8NEA4 188 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 SLC47A1Q96FL8 570 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 WDR77Q9BQA1 342 aaPredicted RBP2.48□□□□□ -2.01
CHD1-201ENST00000284049 A4GALTQ9NPC4 353 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 SLC22A14Q9Y267 594 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 ECM29Q5VYK3 1845 aa2.48□□□□□ -2.01
CHD1-201ENST00000284049 CENPVL1A0A0U1RR11 272 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms