RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SPIBQ01892 262 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 TUBA3CQ13748 450 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 TRIP10Q15642 601 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 TOMM34Q15785 309 aaPredicted RBP8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 AGAP7PQ5VUJ5 663 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 IRAK1BP1Q5VVH5 260 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 SLC22A10Q63ZE4 541 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 TUBA3EQ6PEY2 450 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 TBPL2Q6SJ96 375 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 GRAMD2AQ8IUY3 354 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 CATSPER1Q8NEC5 780 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 FAM71CQ8NEG0 241 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 PHF10Q8WUB8 498 aaKnown RBP8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 CENPNQ96H22 339 aaPredicted RBP8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 AGAP4Q96P64 663 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 PIP5K1AQ99755 562 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 ARMC7Q9H6L4 198 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 YY1AP1Q9H869 796 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 DNAJB9Q9UBS3 223 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 TEKT2Q9UIF3 430 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 CNOT11Q9UKZ1 510 aaKnown RBP8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 SLC35A3Q9Y2D2 325 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 FAM32AQ9Y421 112 aaKnown RBP8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 MGAQ8IWI9 3026 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 MED12Q93074 2177 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 MPDZO75970 2070 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 CFAP47Q6ZTR5 3102 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 H3BNH8 94 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 GNB5O14775 395 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 RRP8O43159 456 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 DEAF1O75398 565 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 LINGO3P0C6S8 592 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 FCGR1AP12314 374 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 RHCEP18577 417 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 TCEA1P23193 301 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 PEX2P28328 305 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 IDH2P48735 452 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 DNASE1L1P49184 302 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 CLK3P49761 638 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 TAS2R41P59536 307 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 GPR85P60893 370 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 EPS8Q12929 822 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 OR1Q1Q15612 314 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 SNCBQ16143 134 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 EXOC3L2Q2M3D2 409 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 COL28A1Q2UY09 1125 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 ISLR2Q6UXK2 745 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 RTL4Q6ZR62 310 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 PLEKHM3Q6ZWE6 761 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 ZNF605Q86T29 641 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 EPHX4Q8IUS5 362 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 CMIPQ8IY22 773 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 CADM2Q8N3J6 435 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 ANKK1Q8NFD2 765 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 RNF217Q8TC41 542 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 ADAMTS16Q8TE57 1224 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 PAQR8Q8TEZ7 354 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 POP5Q969H6 163 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 JSRP1Q96MG2 331 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 NPAS1Q99742 590 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 SLC29A1Q99808 456 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 CIB1Q99828 191 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 UTP23Q9BRU9 249 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 OSBPL11Q9BXB4 747 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 LAT2Q9GZY6 243 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 DSN1Q9H410 356 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 NMNAT1Q9HAN9 279 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 KLHL1Q9NR64 748 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 MAN2C1Q9NTJ4 1040 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 DEPPQ9NTK1 212 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 ACER3Q9NUN7 267 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 C6orf203Q9P0P8 240 aaPredicted RBP8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 LRFN1Q9P244 771 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 ICAM5Q9UMF0 924 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 OAZ3Q9UMX2 235 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 SAMHD1Q9Y3Z3 626 aaKnown RBP8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 CSAG2Q9Y5P2 127 aa8.88□□□□□ -0.99
SNRNP40-201ENST00000263694 CACNA1GO43497 2377 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 TRBV4-1A0A0J9YWV2 114 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 PINLYPA6NC86 204 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 TNFRSF11BO00300 401 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 E2F6O75461 281 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 NEURL1O76050 574 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 GADD45GO95257 159 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 LYPD3O95274 346 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 NUDT14O95848 222 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 ZNF23P17027 643 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 ITGA2P17301 1181 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 PTDSS1P48651 473 aaKnown RBP8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 C17orf67Q0P5P2 114 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 SEC23BQ15437 767 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 OR1C1Q15619 314 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 UNQ6494/PRO21346Q6UXR6 183 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 GDF7Q7Z4P5 450 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 RANBP3LQ86VV4 465 aaPredicted RBP8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 MEX3DQ86XN8 651 aaKnown RBP8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 NKAIN4Q8IVV8 208 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 WDSUB1Q8N9V3 476 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 PSD4Q8NDX1 1056 aa8.87□□□□□ -0.99
SNRNP40-201ENST00000263694 B4GALNT2Q8NHY0 566 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms