RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 IL20Q9NYY1 176 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 NLGN3Q9NZ94 848 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 MAFFQ9ULX9 164 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 AK6Q9Y3D8 172 aaKnown RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 POM121BA6NF01 834 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 UNC119BA6NIH7 251 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 P2RX6O15547 441 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 RGS9O75916 674 aaPredicted RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 KAT7O95251 611 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 CEACAM5P06731 702 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 POLR2CP19387 275 aaPredicted RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 ANXA11P50995 505 aaKnown RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 CLDN12P56749 244 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 DGCR2P98153 550 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 CAMK2BQ13554 666 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 CRMP1Q14194 572 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 GNA13Q14344 377 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 RPE65Q16518 533 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 NTRK2Q16620 822 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 FAM209AQ5JX71 171 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 SFRP4Q6FHJ7 346 aaPredicted RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 ZFAND1Q8TCF1 268 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 C17orf50Q8WW18 174 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 RFT1Q96AA3 541 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 OTUB2Q96DC9 234 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 GIMAP5Q96F15 307 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 ZNF681Q96N22 645 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 CD180Q99467 661 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 ARHGDIGQ99819 225 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 GSDMCQ9BYG8 508 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 CHIAQ9BZP6 476 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 MED28Q9H204 178 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 SLA2Q9H6Q3 261 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 KCNE5Q9UJ90 142 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 NCKAP1Q9Y2A7 1128 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.48□□□□□ -1.05
MSH4-201ENST00000263187 CDH10Q9Y6N8 788 aa8.48□□□□□ -1.05
MSH4-201ENST00000263187 VPS13AQ96RL7 3174 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 GXYLT2A0PJZ3 443 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 CDHR4A6H8M9 788 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 ZSCAN5BA6NJL1 495 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 C4orf47A7E2U8 309 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 CENPBD1B2RD01 187 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 HCN1O60741 890 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 EFCAB14O75071 495 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 NFATC1O95644 943 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 LAMP2P13473 410 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 CPMP14384 443 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 IL9P15248 144 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 FPR3P25089 353 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 CLDN20P56880 219 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 OR1Q1Q15612 314 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 NDUFAF6Q330K2 333 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 ZNF542PQ5EBM4 170 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 MFSD12Q6NUT3 480 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 CD200R1LQ6Q8B3 271 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 VN1R4Q7Z5H5 301 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 SDR9C7Q8NEX9 313 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 OR52L1Q8NGH7 329 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 OR4K13Q8NH42 304 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 AKAP1Q92667 903 aaKnown RBP eCLIP8.47□□□□□ -1.05
MSH4-201ENST00000263187 TIMP4Q99727 224 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 KXD1Q9BQD3 176 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 MED18Q9BUE0 208 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 C11orf49Q9H6J7 331 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 BRD7Q9NPI1 651 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 MGAT4AQ9UM21 535 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 SLC27A6Q9Y2P4 619 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 STON1Q9Y6Q2 735 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 IDSB3KWA1 339 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 PRR23D1E9PI22 279 aaPredicted RBP8.47□□□□□ -1.05
MSH4-201ENST00000263187 PRR23D2P0DMB1 279 aaPredicted RBP8.47□□□□□ -1.05
MSH4-201ENST00000263187 ERP29P30040 261 aaKnown RBP8.47□□□□□ -1.05
MSH4-201ENST00000263187 PKLRP30613 574 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 STAT5AP42229 794 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 TFF2Q03403 129 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 MAB21L1Q13394 359 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 RUNX2Q13950 521 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 SF3A2Q15428 464 aaKnown RBP8.47□□□□□ -1.05
MSH4-201ENST00000263187 ODF4Q2M2E3 257 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 SLC25A30Q5SVS4 291 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 RNLSQ5VYX0 342 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 FAAP20Q6NZ36 180 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 NIPAL3Q6P499 406 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 SFXN4Q6P4A7 337 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 ENPP7Q6UWV6 458 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 ELMOD2Q8IZ81 293 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 LRRC25Q8N386 305 aaPredicted RBP8.47□□□□□ -1.05
MSH4-201ENST00000263187 ZNF433Q8N7K0 673 aaPredicted RBP8.47□□□□□ -1.05
MSH4-201ENST00000263187 TMEM52Q8NDY8 209 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 HCAR2Q8TDS4 363 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 HSD17B8Q92506 261 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 GHSRQ92847 366 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 SMARCD2Q92925 531 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 BADQ92934 168 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 TNFRSF13CQ96RJ3 184 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 PDCD1LG2Q9BQ51 273 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 RPP25Q9BUL9 199 aaKnown RBP8.47□□□□□ -1.05
MSH4-201ENST00000263187 SLC25A18Q9H1K4 315 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms