RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CABIN1Q9Y6J0 2220 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 LOC110117498-PIK3R3F6TDL0 507 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 SSX4O60224 188 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 RFPL3O75679 317 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 SLC35E2P0CK97 266 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 S1PR1P21453 382 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 EMDP50402 254 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 PSG6Q00889 435 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 FABP5Q01469 135 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 ELOCQ15369 112 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 NNATQ16517 81 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 CARTPTQ16568 116 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 FCRLBQ6BAA4 426 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 THSD4Q6ZMP0 1018 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 TOR1AIP2Q8NFQ8 470 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 UFD1Q92890 307 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 RFKQ969G6 155 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 MAP3K3Q99759 626 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 ARHGAP9Q9BRR9 750 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 ZNF649Q9BS31 505 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 HCAR1Q9BXC0 346 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 SACM1LQ9NTJ5 587 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 UGT2A1Q9Y4X1 527 aa17.3■□□□□ 0.36
PDLIM4-201ENST00000253754 IRGMA1A4Y4 181 aa17.29■□□□□ 0.36
PDLIM4-201ENST00000253754 TBXA2RP21731 343 aa17.29■□□□□ 0.36
PDLIM4-201ENST00000253754 SDC2P34741 201 aa17.29■□□□□ 0.36
PDLIM4-201ENST00000253754 INSL4Q14641 139 aa17.29■□□□□ 0.36
PDLIM4-201ENST00000253754 PLK5Q496M5 336 aa17.29■□□□□ 0.36
PDLIM4-201ENST00000253754 CRTC2Q53ET0 693 aaPredicted RBP17.29■□□□□ 0.36
PDLIM4-201ENST00000253754 ZCCHC12Q6PEW1 402 aa17.29■□□□□ 0.36
PDLIM4-201ENST00000253754 CXXC5Q7LFL8 322 aaKnown RBP17.29■□□□□ 0.36
PDLIM4-201ENST00000253754 OR51G2Q8NGK0 314 aa17.29■□□□□ 0.36
PDLIM4-201ENST00000253754 SLC25A46Q96AG3 418 aa17.29■□□□□ 0.36
PDLIM4-201ENST00000253754 TEX12Q9BXU0 123 aa17.29■□□□□ 0.36
PDLIM4-201ENST00000253754 NKX2-2O95096 273 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 HTR1FP30939 366 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 ATP6V1E1P36543 226 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 CAV3P56539 151 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 TPBGQ13641 420 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 NXNL2Q5VZ03 156 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 BRIX1Q8TDN6 353 aaKnown RBP17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 HS6ST2Q96MM7 605 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 SECISBP2Q96T21 854 aaKnown RBP17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 CD180Q99467 661 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 SLX1AQ9BQ83 275 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 SP140LQ9H930 580 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 KRCC1Q9NPI7 259 aaPredicted RBP17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 MEPEQ9NQ76 525 aaPredicted RBP17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 FLRT3Q9NZU0 649 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 V9GYH0 126 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 TRAV27A0A087WT01 109 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 BHLHE40O14503 412 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 FOXS1O43638 330 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 AZGP1P25311 298 aaKnown RBP17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 BTG2P78543 158 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 CSTF1Q05048 431 aaKnown RBP17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 FAM53BQ14153 422 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 QSOX2Q6ZRP7 698 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 BPIFA2Q96DR5 249 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 TMED9Q9BVK6 235 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 FOLH1BQ9HBA9 442 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 MED17Q9NVC6 651 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 SPTBP11277 2137 aa17.28■□□□□ 0.36
PDLIM4-201ENST00000253754 SDC3O75056 442 aa17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 ATP6V1G1O75348 118 aa17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 SAGP10523 405 aaPredicted RBP17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 FNTBP49356 437 aa17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 NXPH1P58417 271 aa17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 PSPHP78330 225 aa17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 CDC20Q12834 499 aa17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 MADCAM1Q13477 382 aa17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 PRTGQ2VWP7 1150 aa17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 CLDN22Q8N7P3 220 aa17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 SPRYD4Q8WW59 207 aaPredicted RBP17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 DNASE2BQ8WZ79 361 aa17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 RIT1Q92963 219 aa17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 DUSP15Q9H1R2 295 aaPredicted RBP17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 WDR70Q9NW82 654 aa17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 PLEKHB1Q9UF11 243 aaPredicted RBP17.27■□□□□ 0.36
PDLIM4-201ENST00000253754 BCAT2O15382 392 aaPredicted RBP17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 HYAL3O43820 417 aaPredicted RBP17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 HMGN1P05114 100 aa17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 PPM1FP49593 454 aaPredicted RBP17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 RUNX1T1Q06455 604 aa17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 DESI1Q6ICB0 168 aa17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 GDPD3Q7L5L3 318 aa17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 ARL14Q8N4G2 192 aa17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 OR51A7Q8NH64 312 aa17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 HPS1Q92902 700 aa17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 KCTD7Q96MP8 289 aa17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 TBX5Q99593 518 aa17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 IER2Q9BTL4 223 aa17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 ISG20L2Q9H9L3 353 aaKnown RBP17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 CPNE5Q9HCH3 593 aa17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 H2AFY2Q9P0M6 372 aaPredicted RBP17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 EXOGQ9Y2C4 368 aaKnown RBP17.27■□□□□ 0.35
PDLIM4-201ENST00000253754 SLC30A4O14863 429 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 PRKNO60260 465 aaPredicted RBP17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 AK1P00568 194 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 IGHA1P01876 353 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms