RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 WDFY2Q96P53 400 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 PRRG3Q9BZD7 231 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 NUAK2Q9H093 628 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 TRIM45Q9H8W5 580 aaPredicted RBP7.31□□□□□ -1.24
CXCR4-201ENST00000241393 HHATLQ9HCP6 504 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 MRPS30Q9NP92 439 aaKnown RBP7.31□□□□□ -1.24
CXCR4-201ENST00000241393 TM7SF3Q9NS93 570 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 GIMAP4Q9NUV9 329 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 NDUFB11Q9NX14 153 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 LYARQ9NX58 379 aaKnown RBP7.31□□□□□ -1.24
CXCR4-201ENST00000241393 KCNE5Q9UJ90 142 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 ZNF229Q9UJW7 825 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 STUB1Q9UNE7 303 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 ENTPD4Q9Y227 616 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 WDR37Q9Y2I8 494 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 KLHL20Q9Y2M5 609 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 ASB4Q9Y574 426 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 STON1Q9Y6Q2 735 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 COL4A3Q01955 1670 aa7.31□□□□□ -1.24
CXCR4-201ENST00000241393 CCDC88CQ9P219 2028 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 NUMA1Q14980 2115 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 HYKKA2RU49 373 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 TMEM221A6NGB7 291 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 PDZK1P1A8MUH7 402 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 ZNF670-ZNF695F2Z2N8 137 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 PYCARD-AS1I3L0S3 204 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 M0R129 80 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 EMC8O43402 210 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 GPX5O75715 221 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 APODP05090 189 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 CHRM4P08173 479 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 HOXC4P09017 264 aaPredicted RBP7.3□□□□□ -1.24
CXCR4-201ENST00000241393 ACP5P13686 325 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 ATP5A1P25705 553 aaKnown RBP7.3□□□□□ -1.24
CXCR4-201ENST00000241393 NDUFS1P28331 727 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 CMPK1P30085 196 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 IFNA8P32881 189 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 UCP3P55916 312 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 STXBP1P61764 594 aaKnown RBP7.3□□□□□ -1.24
CXCR4-201ENST00000241393 EFNB1P98172 346 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 SLAMF1Q13291 335 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 DNASE1L3Q13609 305 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 CSRP2Q16527 193 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 DUSP6Q16828 381 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 LEXMQ3ZCV2 418 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 C3orf38Q5JPI3 329 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 FAM209BQ5JX69 171 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 ZNF776Q68DI1 518 aaPredicted RBP7.3□□□□□ -1.24
CXCR4-201ENST00000241393 ZNF425Q6IV72 752 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 SLC48A1Q6P1K1 146 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 VITQ6UXI7 678 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 RNF44Q7L0R7 432 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 ZER1Q7Z7L7 766 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 SFTPA1Q8IWL2 248 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 SAMD14Q8IZD0 417 aaPredicted RBP7.3□□□□□ -1.24
CXCR4-201ENST00000241393 HDDC3Q8N4P3 179 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 POC5Q8NA72 575 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 MFSD9Q8NBP5 474 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 MORN4Q8NDC4 146 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 OR4K5Q8NGD3 323 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 VANGL1Q8TAA9 524 aaPredicted RBP7.3□□□□□ -1.24
CXCR4-201ENST00000241393 GNPDA2Q8TDQ7 276 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 ASB12Q8WXK4 309 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 FGF11Q92914 225 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 SPSB4Q96A44 273 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 IL4I1Q96RQ9 567 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 ARHGDIGQ99819 225 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 C17orf62Q9BQA9 187 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 TSSK6Q9BXA6 273 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 AICDAQ9GZX7 198 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 KIR3DX1Q9H7L2 352 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 FGF20Q9NP95 211 aaPredicted RBP7.3□□□□□ -1.24
CXCR4-201ENST00000241393 MBNL1Q9NR56 388 aaKnown RBP7.3□□□□□ -1.24
CXCR4-201ENST00000241393 ABCB10Q9NRK6 738 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 MAN2C1Q9NTJ4 1040 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 C5AR2Q9P296 337 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 TRPC4Q9UBN4 977 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 TESQ9UGI8 421 aaKnown RBP7.3□□□□□ -1.24
CXCR4-201ENST00000241393 CES1P1Q9UKY3 287 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 SNX7Q9UNH6 387 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 TRPM6Q9BX84 2022 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 MYO7AQ13402 2215 aa7.3□□□□□ -1.24
CXCR4-201ENST00000241393 KIAA0100Q14667 2235 aaKnown RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 IQCMA0A1B0GVH7 501 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 TMEM129A0AVI4 362 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 GSAPA4D1B5 854 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 M0R3H8 397 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 MYL12BO14950 172 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 ERI3O43414 337 aaKnown RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 CSO75390 466 aaKnown RBP7.29□□□□□ -1.24
CXCR4-201ENST00000241393 SOX14O95416 240 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 RAB36O95755 333 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 AGR2O95994 175 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 IL1AP01583 271 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 APOA1P02647 267 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 ADRA2AP08913 450 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 F3P13726 295 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 MMP11P24347 488 aa7.29□□□□□ -1.24
CXCR4-201ENST00000241393 PRKAR1BP31321 381 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms