RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 GPR3P46089 330 aa10.89□□□□□ -0.67
TNFAIP1-201ENST00000226225 GPR68Q15743 365 aa10.89□□□□□ -0.67
TNFAIP1-201ENST00000226225 VWA2Q5GFL6 755 aa10.89□□□□□ -0.67
TNFAIP1-201ENST00000226225 FAHD1Q6P587 224 aa10.89□□□□□ -0.67
TNFAIP1-201ENST00000226225 DEF8Q6ZN54 512 aa10.89□□□□□ -0.67
TNFAIP1-201ENST00000226225 FAM109AQ8N4B1 249 aa10.89□□□□□ -0.67
TNFAIP1-201ENST00000226225 GAL3ST4Q96RP7 486 aa10.89□□□□□ -0.67
TNFAIP1-201ENST00000226225 QRSL1Q9H0R6 528 aaKnown RBP10.89□□□□□ -0.67
TNFAIP1-201ENST00000226225 ACSS1Q9NUB1 689 aaPredicted RBP10.89□□□□□ -0.67
TNFAIP1-201ENST00000226225 ALG5Q9Y673 324 aa10.89□□□□□ -0.67
TNFAIP1-201ENST00000226225 SLC22A7Q9Y694 548 aa10.89□□□□□ -0.67
TNFAIP1-201ENST00000226225 EMC8O43402 210 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 LDOC1O95751 146 aaPredicted RBP10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 CSF3P09919 207 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 TMEM52Q8NDY8 209 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 PMEPA1Q969W9 287 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 TBC1D20Q96BZ9 403 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 CD180Q99467 661 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 CCDC32Q9BV29 185 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 LRRN3Q9H3W5 708 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 BEX1Q9HBH7 125 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 SLC23A1Q9UHI7 598 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 ZNF222Q9UK12 451 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 RARRES3Q9UL19 164 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 MKL2Q9ULH7 1088 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 SSR3Q9UNL2 185 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 SPIN1Q9Y657 262 aaPredicted RBP10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 LOC105371267A0A1B0GV96 52 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 MYL12BO14950 172 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 TSFMP43897 325 aaKnown RBP10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 CRYBA2P53672 197 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 NSDHLQ15738 373 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 CCNJQ5T5M9 372 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 REEP3Q6NUK4 255 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 MAMSTRQ6ZN01 415 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 TCEANCQ8N8B7 351 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 OR1L3Q8NH93 324 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 OPALINQ96PE5 141 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 ZNF607Q96SK3 696 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 SRRQ9GZT4 340 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 HHATLQ9HCP6 504 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 FAM86C1Q9NVL1 165 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 TVP23BQ9NYZ1 205 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 P2RX2Q9UBL9 471 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 GRIP1Q9Y3R0 1128 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 GADD45GO95257 159 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 GASTP01350 101 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 EPHA4P54764 986 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 POU4F3Q15319 338 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 SPHARQ15513 63 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 OR2G6Q5TZ20 316 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 MRM1Q6IN84 353 aaKnown RBP10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 TMEM71Q6P5X7 295 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 FIGNL1Q6PIW4 674 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 CAMKMTQ7Z624 323 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 CDH24Q86UP0 819 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 CA13Q8N1Q1 262 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 COX18Q8N8Q8 333 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 LRRC20Q8TCA0 184 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 SLC38A5Q8WUX1 472 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 RIT1Q92963 219 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 TM4SF19Q96DZ7 209 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 ELP4Q96EB1 424 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 C7orf34Q96L11 122 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 DOHHQ9BU89 302 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 SARGQ9BW04 601 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 HDHD2Q9H0R4 259 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 GABARAPL1Q9H0R8 117 aa10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 AKAP7Q9P0M2 348 aaPredicted RBP10.88□□□□□ -0.67
TNFAIP1-201ENST00000226225 OR10H3O60404 316 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 SLC2A2P11168 524 aaPredicted RBP10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 FBLP22087 321 aaKnown RBP10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 KHKP50053 298 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 CFHR1Q03591 330 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 ZNF630Q2M218 657 aaPredicted RBP10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 VWA5B2Q8N398 1253 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 SLC16A11Q8NCK7 471 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 OR56A1Q8NGH5 318 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 PPIL3Q9H2H8 161 aaKnown RBP10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 PCDHGB2Q9Y5G2 931 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 POLR1CO15160 346 aaPredicted RBP10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 EVI2BP34910 448 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 CLDN6P56747 220 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 INSL4Q14641 139 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 P2RY14Q15391 338 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 ZNHIT3Q15649 155 aaPredicted RBP10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 CRTC2Q53ET0 693 aaPredicted RBP10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 SAXO2Q658L1 398 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 ATCAYQ86WG3 371 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 OR7G2Q8NG99 324 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 RNF170Q96K19 258 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 PITX2Q99697 317 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 ZNF304Q9HCX3 659 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 ACOXLQ9NUZ1 547 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 ZNF224Q9NZL3 707 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 MUC6Q6W4X9 2439 aa10.87□□□□□ -0.67
TNFAIP1-201ENST00000226225 TRAV6A0A075B6T7 132 aa10.86□□□□□ -0.67
TNFAIP1-201ENST00000226225 A0A1W2PQM1 296 aa10.86□□□□□ -0.67
TNFAIP1-201ENST00000226225 CSO75390 466 aaKnown RBP10.86□□□□□ -0.67
TNFAIP1-201ENST00000226225 GIMD1P0DJR0 217 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms