RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 OPN1LWP04000 364 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 ZNF16P17020 682 aaPredicted RBP9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 PVALBP20472 110 aaPredicted RBP9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 PRKXP51817 358 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 SLC35A1P78382 337 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 CHRFAM7AQ494W8 412 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 GXYLT1Q4G148 440 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 TMEM71Q6P5X7 295 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 MED25Q71SY5 747 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 CBLL1Q75N03 491 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 CHTF18Q8WVB6 975 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 TREX2Q9BQ50 279 aaPredicted RBP9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 RPP25Q9BUL9 199 aaKnown RBP9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 VN1R3Q9BXE9 311 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 ULBP2Q9BZM5 246 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 TRPV4Q9HBA0 871 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 MBD2Q9UBB5 411 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 AASSQ9UDR5 926 aa9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 NUFIP1Q9UHK0 495 aaKnown RBP9.67□□□□□ -0.86
NIPAL3-201ENST00000003912 LRIT2A6NDA9 550 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 RFPL3O75679 317 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 RPS5P46782 204 aaKnown RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 CHRNEQ04844 493 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 MAP4K2Q12851 820 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 KCNAB1Q14722 419 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 RSU1Q15404 277 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 LIMS2Q7Z4I7 341 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 CPOQ8IVL8 374 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 IQCF1Q8N6M8 205 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ISL2Q96A47 359 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 MVB12AQ96EY5 273 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 LINC00615Q96LM1 132 aaPredicted RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 AMDHD1Q96NU7 426 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 CDCP1Q9H5V8 836 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 SLC17A4Q9Y2C5 497 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 COL11A2P13942 1736 aaPredicted RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 FZD6O60353 706 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 TACR1P25103 407 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ERVK-25P63136 954 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 HOXC5Q00444 222 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ZNF404Q494X3 552 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 PRSS36Q5K4E3 855 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 SLC22A16Q86VW1 577 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 OR5AK2Q8NH90 309 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 MGLLQ99685 303 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 OR52A5Q9H2C5 316 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 DPAGT1Q9H3H5 408 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 KCNIP1Q9NZI2 227 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ATG4BQ9Y4P1 393 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 COL4A5P29400 1685 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 PLSCR5A0PG75 271 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ANKRD30BLA7E2S9 258 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 LRRN3E7EW58 273 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 F5H5K5 113 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 SUSD5O60279 629 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 NSA2O95478 260 aaKnown RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 STSP08842 583 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ALDOCP09972 364 aaKnown RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ARNTP27540 789 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 POU3F1Q03052 451 aaPredicted RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 HNRNPA0Q13151 305 aaKnown RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 SYCE2Q6PIF2 218 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 CCL4L1Q8NHW4 92 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ACTR6Q9GZN1 396 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ATG5Q9H1Y0 275 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 OR10A2Q9H208 303 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ERVK-18Q9QC07 812 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ZNF221Q9UK13 617 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ADAM18Q9Y3Q7 739 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 MEGF11A6BM72 1044 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 LILRA5A6NI73 299 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 H0YIG0 161 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 MSX1P28360 303 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 RBM34P42696 430 aaKnown RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 GABARAPL2P60520 117 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 LTB4RQ15722 352 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ATAD3CQ5T2N8 411 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 KIAA0907Q7Z7F0 614 aaPredicted RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 RNF113BQ8IZP6 322 aaKnown RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 GALNT15Q8N3T1 639 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 PPP1R35Q8TAP8 253 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 SENP5Q96HI0 755 aaPredicted RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 INTS14Q96SY0 518 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 GLIPR2Q9H4G4 154 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ZNF442Q9H7R0 627 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ZNF701Q9NV72 531 aaPredicted RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 SNX11Q9Y5W9 270 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 MTCH2Q9Y6C9 303 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 CCDC187A0A096LP49 1063 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 TMEM221A6NGB7 291 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 M0R296 226 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 ANXA3P12429 323 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 TEAD1P28347 426 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 EIF5AP63241 154 aaKnown RBP9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 FCRLBQ6BAA4 426 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 CYB561A3Q8NBI2 242 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 MS4A6EQ96DS6 147 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 C16orf58Q96GQ5 468 aa9.66□□□□□ -0.86
NIPAL3-201ENST00000003912 CCDC74BQ96LY2 380 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms