RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 P01680 129 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Pcp2P12660 120 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Rab21P35282 222 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Lpcat1Q3TFD2 534 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Gngt2Q61017 69 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Pum2Q80U58 1066 aaKnown RBP19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Samd4bQ80XS6 687 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 ZxdcQ8C8V1 858 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 CcsapQ8QZT2 252 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 B4galt7Q8R087 327 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Tmem185bQ8R3R5 350 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Micu1Q8VCX5 477 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Olfr1312Q8VF10 317 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 PsphQ99LS3 225 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 CsQ9CZU6 464 aaKnown RBP19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Upk1aQ9D132 257 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Elovl4Q9EQC4 312 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Ap3m1Q9JKC8 418 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Ptpn4Q9WU22 926 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Gcn1E9PVA8 2671 aaKnown RBP19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Ankrd12G5E893 2041 aa19.13■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 1700084M14RikB1AT01 78 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Lipo4D3Z608 396 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Il20rbE9Q9A6 308 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 B4galnt1Q09200 533 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Defb33Q30KN3 62 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Alg6Q3TAE8 507 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Pde12Q3TIU4 608 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Wfdc5Q4KXB6 126 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 P2ry10bQ8BY68 352 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Gpr22Q8BZL4 432 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Lsm14aQ8K2F8 462 aaKnown RBP19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Olfr340Q8VGL0 312 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Olfr61Q8VGM2 311 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Zkscan3Q91VW9 553 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Mrgpra8Q91ZC4 305 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Pacsin3Q99JB8 424 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 EtfaQ99LC5 333 aaKnown RBP19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Zfpl1Q9DB43 310 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Clca3a1Q9QX15 902 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Ramp3Q9WUP1 147 aa19.12■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Gm28360A0A087WR25 190 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Ighv15-2A0A0A6YX72 118 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Kcnmb3E9Q7U0 239 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Tgfb1P04202 390 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 GrnP28798 589 aaKnown RBP19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Ranbp1P34022 203 aaKnown RBP19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Olfr13P34984 310 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Slc7a10P63115 530 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Usp22Q5DU02 525 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Nr1h4Q60641 488 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 ShhQ62226 437 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Capn11Q6J756 714 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Oog2Q7TPX8 476 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Pou6f2Q8BJI4 691 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Lhfpl6Q8BM86 200 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Dusp28Q8BTR5 163 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Rbms3Q8BWL5 431 aaKnown RBP19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Q8K039 155 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Vmn1r28Q8R2C9 302 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Ddit4lQ8VHZ5 193 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Abhd3Q91ZH7 411 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Zfp61Q923D1 555 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Gmpr2Q99L27 348 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Hormad1Q9D5T7 392 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Echdc3Q9D7J9 300 aa19.11■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Olfr549E9Q542 316 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Gm7945F6QI24 236 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Dnmt3bO88509 859 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Zfp37P17141 594 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 P18532 116 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Il5raP21183 415 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Wnt11P48615 354 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Faf1P54731 649 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Vipr1P97751 459 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Aqp1Q02013 269 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Fthl17dQ3SXD1 176 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Gstt2Q61133 244 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Epha6Q62413 1035 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Nqo1Q64669 274 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Trim36Q80WG7 729 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Nabp1Q8BGW5 198 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Dleu7Q8CHZ8 209 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Unc5dQ8K1S2 956 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Angptl7Q8R1Q3 337 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 NrmQ8VC65 262 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Olfr449Q8VGW8 311 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Prpf19Q99KP6 504 aaKnown RBP19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Fthl17Q99MX2 176 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Use1Q9CQ56 270 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Gm10762Q9CZN6 115 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Tvp23bQ9D8T4 205 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Dpep3Q9DA79 493 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 MecrQ9DCS3 373 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Sorcs1Q9JLC4 1167 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Mapk11Q9WUI1 364 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Gsk3bQ9WV60 420 aa19.1■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Olfr310B2RVZ1 332 aa19.09■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Zfp97E9PZP6 546 aa19.09■□□□□ 0.65
Ssbp4-201ENSMUST00000049908 Olfr209L7N1X3 305 aa19.09■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms