RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 S100A14Q9HCY8 104 aa15.98■□□□□ 0.15
PHGDH-230ENST00000641927 SH2D2AQ9NP31 389 aa15.98■□□□□ 0.15
PHGDH-230ENST00000641927 IL1RAPQ9NPH3 570 aa15.98■□□□□ 0.15
PHGDH-230ENST00000641927 PPP4R1LQ9P1A2 415 aa15.98■□□□□ 0.15
PHGDH-230ENST00000641927 WIF1Q9Y5W5 379 aa15.98■□□□□ 0.15
PHGDH-230ENST00000641927 CHD8Q9HCK8 2581 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 OIP5O43482 229 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 SEMG1P04279 462 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 PTGDSP41222 190 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 VLDLRP98155 873 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 PLAURQ03405 335 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 ZNF117Q03924 483 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 NRF1Q16656 503 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 CBLN3Q6UW01 205 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 ZNF550Q7Z398 422 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 HAS2Q92819 552 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 JSRP1Q96MG2 331 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-230ENST00000641927 SMAD5Q99717 465 aaKnown RBP15.97■□□□□ 0.15
PHGDH-230ENST00000641927 AMBRA1Q9C0C7 1298 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 RNF32Q9H0A6 362 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 YY1AP1Q9H869 796 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 KLHL1Q9NR64 748 aa15.97■□□□□ 0.15
PHGDH-230ENST00000641927 FAM32AQ9Y421 112 aaKnown RBP15.97■□□□□ 0.15
PHGDH-230ENST00000641927 MKRN2OSH3BPM6 223 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 CDK2AP1O14519 115 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 AP3D1O14617 1153 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 TIPRLO75663 272 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 DIRAS1O95057 198 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 NUDT14O95848 222 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 PRG2P13727 222 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 ITGA2P17301 1181 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 HOXB6P17509 224 aaKnown RBP15.96■□□□□ 0.15
PHGDH-230ENST00000641927 MASP1P48740 699 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 GAS1P54826 345 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 GPR85P60893 370 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 SKP2Q13309 424 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 PACS2Q86VP3 889 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 RANBP3LQ86VV4 465 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-230ENST00000641927 GRAMD2AQ8IUY3 354 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 KDF1Q8NAX2 398 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-230ENST00000641927 RNF138Q8WVD3 245 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 TM9SF4Q92544 642 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 DUS3LQ96G46 650 aaKnown RBP15.96■□□□□ 0.15
PHGDH-230ENST00000641927 C5orf34Q96MH7 638 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 PRR14Q9BWN1 585 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 ANGPTL4Q9BY76 406 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 ARMC1Q9NVT9 282 aa15.96■□□□□ 0.15
PHGDH-230ENST00000641927 EIF4E2O60573 245 aaKnown RBP15.95■□□□□ 0.14
PHGDH-230ENST00000641927 BAG2O95816 211 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 CD46P15529 392 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 DNASE1L1P49184 302 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 FOXD4Q12950 439 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-230ENST00000641927 COL28A1Q2UY09 1125 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 TMEM81Q6P7N7 255 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 AAGABQ6PD74 315 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 ZNF440Q8IYI8 595 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 CATSPER1Q8NEC5 780 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 FAM71CQ8NEG0 241 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 B4GALNT2Q8NHY0 566 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 C7orf34Q96L11 122 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 HES7Q9BYE0 225 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 LAT2Q9GZY6 243 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 CTPS2Q9NRF8 586 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 NDUFAF4Q9P032 175 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 PCDHGA9Q9Y5G4 932 aaKnown RBP15.95■□□□□ 0.14
PHGDH-230ENST00000641927 ANKRD11Q6UB99 2663 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-230ENST00000641927 NINQ8N4C6 2090 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 ANKRD33BA6NCL7 494 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 H3BNX3 289 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 J3KTA2 159 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 ADAM10O14672 748 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 GNB5O14775 395 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 HNRNPRO43390 633 aaKnown RBP15.95■□□□□ 0.14
PHGDH-230ENST00000641927 SNX4O95219 450 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 LINGO3P0C6S8 592 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 RCN1Q15293 331 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 INPP5JQ15735 1006 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-230ENST00000641927 NPTX1Q15818 432 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 IGFL2Q6UWQ7 119 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 CYP4Z1Q86W10 505 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 PAPD5Q8NDF8 572 aaKnown RBP15.95■□□□□ 0.14
PHGDH-230ENST00000641927 MDS2Q8NDY4 140 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 TOR1AIP2Q8NFQ8 470 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 SNRNP27Q8WVK2 155 aaKnown RBP15.95■□□□□ 0.14
PHGDH-230ENST00000641927 MCHR1Q99705 422 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 EVA1AQ9H8M9 152 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 EXOSC3Q9NQT5 275 aaKnown RBP15.95■□□□□ 0.14
PHGDH-230ENST00000641927 MED11Q9P086 117 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 NTNG1Q9Y2I2 539 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 CSAG2Q9Y5P2 127 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 ENPP4Q9Y6X5 453 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 MGAQ8IWI9 3026 aa15.95■□□□□ 0.14
PHGDH-230ENST00000641927 A0A0G2JMM0 328 aa15.94■□□□□ 0.14
PHGDH-230ENST00000641927 A0A1W2PPB8 328 aa15.94■□□□□ 0.14
PHGDH-230ENST00000641927 A0A1W2PRS3 328 aa15.94■□□□□ 0.14
PHGDH-230ENST00000641927 CPSF4LA6NMK7 179 aaKnown RBP15.94■□□□□ 0.14
PHGDH-230ENST00000641927 KIR3DP1A8MWS1 328 aa15.94■□□□□ 0.14
PHGDH-230ENST00000641927 GNGT2O14610 69 aa15.94■□□□□ 0.14
PHGDH-230ENST00000641927 CST1P01037 141 aa15.94■□□□□ 0.14
PHGDH-230ENST00000641927 ITGB2P05107 769 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms