RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 TRMT2BQ96GJ1 504 aaKnown RBP7.8□□□□□ -1.16
NECAP1-227ENST00000640648 PTPN18Q99952 460 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 STRCQ7RTU9 1775 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 PHOX2AO14813 284 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 CST2P09228 141 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 GABRB1P18505 474 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 FRKP42685 505 aaPredicted RBP7.8□□□□□ -1.16
NECAP1-227ENST00000640648 CSNK1EP49674 416 aaKnown RBP7.8□□□□□ -1.16
NECAP1-227ENST00000640648 EPHA5P54756 1037 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 ZNF616Q08AN1 781 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 ADAM5Q6NVV9 412 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 B3GNT9Q6UX72 402 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 B3GLCTQ6Y288 498 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 TMPRSS11FQ6ZWK6 438 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 DTWD1Q8N5C7 304 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 OR5M8Q8NGP6 311 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 OR5AK3PQ8NH89 298 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 TIFAQ96CG3 184 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 PITX2Q99697 317 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 MTIF3Q9H2K0 278 aaKnown RBP7.8□□□□□ -1.16
NECAP1-227ENST00000640648 NEUROD4Q9HD90 331 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 APMAPQ9HDC9 416 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 PARPBPQ9NWS1 579 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 PLEKHM1Q9Y4G2 1056 aa7.8□□□□□ -1.16
NECAP1-227ENST00000640648 RBM7Q9Y580 266 aaKnown RBP7.8□□□□□ -1.16
NECAP1-227ENST00000640648 LAMA4Q16363 1823 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 CCDC163A0A0D9SF12 145 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 TMEM129A0AVI4 362 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 BCL2L11O43521 198 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 EDN1P05305 212 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 PRSS3P35030 304 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 BMI1P35226 326 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 AVPR1BP47901 424 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 DNASE1L1P49184 302 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 PABPC1L2AQ5JQF8 200 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 ELFN2Q5R3F8 820 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 HEPHL1Q6MZM0 1159 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 OPN5Q6U736 354 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 COMMD2Q86X83 199 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 PLPP6Q8IY26 295 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 ZFP82Q8N141 532 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 TMEM151AQ8N4L1 468 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 GMLQ99445 158 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 C20orf85Q9H1P6 137 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 ACKR4Q9NPB9 350 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 MARCH4Q9P2E8 410 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-227ENST00000640648 TMED3Q9Y3Q3 217 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 A0A0G2JN53 185 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 SMIM30A4D0T7 59 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 PTBP3O95758 552 aaKnown RBP7.79□□□□□ -1.16
NECAP1-227ENST00000640648 SLC16A8O95907 504 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 PFKMP08237 780 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 HOXD4P09016 255 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-227ENST00000640648 SLC35G4P0C7Q5 338 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 NSG1P42857 185 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 PTTG1IPP53801 180 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 CLDN8P56748 225 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 LCN6P62502 163 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 GPR176Q14439 515 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 COL5A1-AS1Q5SY13 56 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 PRPF38BQ5VTL8 546 aaKnown RBP7.79□□□□□ -1.16
NECAP1-227ENST00000640648 KDM4DQ6B0I6 523 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 GOLGA7Q7Z5G4 137 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 TMED4Q7Z7H5 227 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 PELI3Q8N2H9 469 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 SLC43A2Q8N370 569 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 FAM98AQ8NCA5 519 aaKnown RBP7.79□□□□□ -1.16
NECAP1-227ENST00000640648 POC1BQ8TC44 478 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 SCGB1C1Q8TD33 95 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 TSEN15Q8WW01 171 aaKnown RBP7.79□□□□□ -1.16
NECAP1-227ENST00000640648 BRINP2Q9C0B6 783 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 C20orf27Q9GZN8 174 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 PARD6AQ9NPB6 346 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 NDUFB11Q9NX14 153 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 OSER1Q9NX31 292 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 NDRG4Q9ULP0 352 aaKnown RBP7.79□□□□□ -1.16
NECAP1-227ENST00000640648 SLC22A14Q9Y267 594 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 EXOGQ9Y2C4 368 aaKnown RBP7.79□□□□□ -1.16
NECAP1-227ENST00000640648 C13orf42A0A1B0GVH6 325 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 DUXAA6NLW8 204 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 CPSF4LA6NMK7 179 aaKnown RBP7.79□□□□□ -1.16
NECAP1-227ENST00000640648 HAS3O00219 553 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 GPR171O14626 319 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 AKR7A2O43488 359 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 NDUFA2O43678 99 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 HPGDSO60760 199 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 HLA-DQA2P01906 255 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 ALDOCP09972 364 aaKnown RBP7.79□□□□□ -1.16
NECAP1-227ENST00000640648 CCND3P30281 292 aaPredicted RBP7.79□□□□□ -1.16
NECAP1-227ENST00000640648 ECI1P42126 302 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 EVX1P49640 407 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 OR2B8PP59922 312 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 CAMK2DQ13557 499 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 PTPRRQ15256 657 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 XAF1Q6GPH4 301 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 MED27Q6P2C8 311 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 APCDD1Q8J025 514 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 C2CD4CQ8TF44 421 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 DPF1Q92782 380 aa7.79□□□□□ -1.16
NECAP1-227ENST00000640648 TOE1Q96GM8 510 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms