RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 P2RX1P51575 399 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 CCR4P51679 360 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 DSCR4P56555 118 aaPredicted RBP11.99□□□□□ -0.49
GTF3A-209ENST00000640289 LIPEQ05469 1076 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 SKP2Q13309 424 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 MRPL49Q13405 166 aaKnown RBP11.99□□□□□ -0.49
GTF3A-209ENST00000640289 LIN52Q52LA3 116 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 KRTCAP3Q53RY4 240 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 ZNF311Q5JNZ3 666 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 MRPL2Q5T653 305 aaKnown RBP11.99□□□□□ -0.49
GTF3A-209ENST00000640289 GFRALQ6UXV0 394 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 RINLQ6ZS11 566 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 TRILQ7L0X0 811 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 FGD2Q7Z6J4 655 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 CHERPQ8IWX8 916 aaKnown RBP11.99□□□□□ -0.49
GTF3A-209ENST00000640289 GHDCQ8N2G8 530 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 TMCO5AQ8N6Q1 288 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 RBM15BQ8NDT2 890 aaKnown RBP11.99□□□□□ -0.49
GTF3A-209ENST00000640289 ST6GALNAC3Q8NDV1 305 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 OR2T12Q8NG77 320 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 OR14L1PQ8NHC6 308 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 OIT3Q8WWZ8 545 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 CNOT9Q92600 299 aaKnown RBP11.99□□□□□ -0.49
GTF3A-209ENST00000640289 ZNF524Q96C55 264 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 C1GALT1C1Q96EU7 318 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 REXO5Q96IC2 774 aaKnown RBP11.99□□□□□ -0.49
GTF3A-209ENST00000640289 NPAS1Q99742 590 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 SPATA9Q9BWV2 254 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 OR2B2Q9GZK3 357 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 LDAHQ9H6V9 325 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 PTGES2Q9H7Z7 377 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 ACKR4Q9NPB9 350 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 PLSCR2Q9NRY7 297 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 RLIMQ9NVW2 624 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 ABCD2Q9UBJ2 740 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 ICAM5Q9UMF0 924 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 VDAC3Q9Y277 283 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 ZNF443Q9Y2A4 671 aaPredicted RBP11.99□□□□□ -0.49
GTF3A-209ENST00000640289 SLC35A3Q9Y2D2 325 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 SLC6A5Q9Y345 797 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 CHST2Q9Y4C5 530 aa11.99□□□□□ -0.49
GTF3A-209ENST00000640289 GPC6Q9Y625 555 aaPredicted RBP11.99□□□□□ -0.49
GTF3A-209ENST00000640289 TRGV5A0A0B4J1U4 118 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 ANKUB1A6NFN9 424 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 SHISA8B8ZZ34 492 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 EIF4E2O60573 245 aaKnown RBP11.98□□□□□ -0.49
GTF3A-209ENST00000640289 ADAM11O75078 769 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 MSX1P28360 303 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 UQCRFS1P47985 274 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 GSK3BP49841 420 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 PCBP3P57721 371 aaKnown RBP11.98□□□□□ -0.49
GTF3A-209ENST00000640289 EEF1A1P68104 462 aaKnown RBP11.98□□□□□ -0.49
GTF3A-209ENST00000640289 DMTNQ08495 405 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 TOMM34Q15785 309 aaPredicted RBP11.98□□□□□ -0.49
GTF3A-209ENST00000640289 MICU2Q8IYU8 434 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 DEFB107AQ8IZN7 70 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 PGAM4Q8N0Y7 254 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 CLIP4Q8N3C7 705 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 RNF148Q8N7C7 305 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 FAM71CQ8NEG0 241 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 OR5M1Q8NGP8 315 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 NEIL3Q8TAT5 605 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 LAT2Q9GZY6 243 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 ALG2Q9H553 416 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 EXO5Q9H790 373 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 SPAG4Q9NPE6 437 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 DNAJB12Q9NXW2 375 aaKnown RBP11.98□□□□□ -0.49
GTF3A-209ENST00000640289 TAS2R10Q9NYW0 307 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 ADA2Q9NZK5 511 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 TMEM181Q9P2C4 612 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 SPRR3Q9UBC9 169 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 IFT52Q9Y366 437 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 FAM208BQ5VWN6 2430 aa11.98□□□□□ -0.49
GTF3A-209ENST00000640289 A0A1B0GVC2 190 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 ELOVL7A1L3X0 281 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 M0QX08 132 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 TPST1O60507 370 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 HCN1O60741 890 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 WISP1O95388 367 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 NUDT14O95848 222 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 EPPINO95925 133 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 THBS1P07996 1170 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 GNLYP22749 145 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 RYKP34925 604 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 CPOXP36551 454 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 MNAT1P51948 309 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 EEFSECP57772 596 aaKnown RBP11.97□□□□□ -0.49
GTF3A-209ENST00000640289 GANABQ14697 944 aaKnown RBP11.97□□□□□ -0.49
GTF3A-209ENST00000640289 LARS2Q15031 903 aaKnown RBP11.97□□□□□ -0.49
GTF3A-209ENST00000640289 GLIPR1L2Q4G1C9 344 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 RNF220Q5VTB9 566 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 ERICH5Q6P6B1 374 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 C16orf89Q6UX73 402 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 COMTD1Q86VU5 262 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 LSRQ86X29 649 aaPredicted RBP11.97□□□□□ -0.49
GTF3A-209ENST00000640289 KRT73Q86Y46 540 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 SLC30A8Q8IWU4 369 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 CMIPQ8IY22 773 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 SMYD1Q8NB12 490 aa11.97□□□□□ -0.49
GTF3A-209ENST00000640289 GALNT11Q8NCW6 608 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms