RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SNTG1Q9NSN8 517 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 C14orf105Q9NVL8 296 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 TXNL4BQ9NX01 149 aaKnown RBP19.9■□□□□ 0.78
CLN6-224ENST00000638076 FBXL21Q9UKT6 434 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 A0A075B6Q4 140 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 LILRA5A6NI73 299 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 FAM183AA6NL82 134 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 STK25O00506 426 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 SOCS6O14544 535 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 HTR1FP30939 366 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 MLLT3P42568 568 aaPredicted RBP19.9■□□□□ 0.78
CLN6-224ENST00000638076 ZNF267Q14586 743 aaPredicted RBP19.9■□□□□ 0.78
CLN6-224ENST00000638076 CCDC85BQ15834 202 aaPredicted RBP19.9■□□□□ 0.78
CLN6-224ENST00000638076 ZNF181Q2M3W8 571 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 ZNF613Q6PF04 617 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 BPIFA2Q96DR5 249 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 MMABQ96EY8 250 aaPredicted RBP19.9■□□□□ 0.78
CLN6-224ENST00000638076 VSTM2LQ96N03 204 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 DGAT2Q96PD7 388 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 CRNNQ9UBG3 495 aaPredicted RBP19.9■□□□□ 0.78
CLN6-224ENST00000638076 YARS2Q9Y2Z4 477 aaKnown RBP19.9■□□□□ 0.78
CLN6-224ENST00000638076 MED31Q9Y3C7 131 aa19.9■□□□□ 0.78
CLN6-224ENST00000638076 CLDN4O14493 209 aa19.89■□□□□ 0.77
CLN6-224ENST00000638076 PLD2O14939 933 aa19.89■□□□□ 0.77
CLN6-224ENST00000638076 SPTBP11277 2137 aa19.89■□□□□ 0.77
CLN6-224ENST00000638076 BMP7P18075 431 aa19.89■□□□□ 0.77
CLN6-224ENST00000638076 TBXA2RP21731 343 aa19.89■□□□□ 0.77
CLN6-224ENST00000638076 IGLV3-21P80748 117 aaPredicted RBP19.89■□□□□ 0.77
CLN6-224ENST00000638076 SPANXN2Q5MJ10 180 aa19.89■□□□□ 0.77
CLN6-224ENST00000638076 SMARCD3Q6STE5 483 aa19.89■□□□□ 0.77
CLN6-224ENST00000638076 CXXC5Q7LFL8 322 aaKnown RBP19.89■□□□□ 0.77
CLN6-224ENST00000638076 CDK20Q8IZL9 346 aa19.89■□□□□ 0.77
CLN6-224ENST00000638076 FAM83FQ8NEG4 500 aaPredicted RBP19.89■□□□□ 0.77
CLN6-224ENST00000638076 PTCHD1Q96NR3 888 aa19.89■□□□□ 0.77
CLN6-224ENST00000638076 ARHGAP9Q9BRR9 750 aa19.89■□□□□ 0.77
CLN6-224ENST00000638076 SOHLH2Q9NX45 425 aa19.89■□□□□ 0.77
CLN6-224ENST00000638076 CLDN16Q9Y5I7 305 aa19.89■□□□□ 0.77
CLN6-224ENST00000638076 A0A0B4J2E0 115 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 A0A1B0GX12 115 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 LRRTM2O43300 516 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 ADAM11O75078 769 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 MAOAP21397 527 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 GTF2E2P29084 291 aaKnown RBP19.88■□□□□ 0.77
CLN6-224ENST00000638076 GABRA4P48169 554 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 RORCP51449 518 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 RACK1P63244 317 aaKnown RBP19.88■□□□□ 0.77
CLN6-224ENST00000638076 TPBGQ13641 420 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 DSG2Q14126 1118 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 DEFB133Q30KQ1 61 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 STEAP3Q658P3 488 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 CCDC190Q86UF4 302 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 OR6C4Q8NGE1 309 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 ISYNA1Q9NPH2 558 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 FLRT3Q9NZU0 649 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 PLCL2Q9UPR0 1127 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 EXOGQ9Y2C4 368 aaKnown RBP19.88■□□□□ 0.77
CLN6-224ENST00000638076 IGHV5-51A0A0C4DH38 117 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 ISPDA4D126 451 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 SYNDIG1LA6NDD5 238 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 BHLHE40O14503 412 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 ATXN8OSP0DMR3 200 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 SAGP10523 405 aaPredicted RBP19.88■□□□□ 0.77
CLN6-224ENST00000638076 ATP6V1E1P36543 226 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 ETV6P41212 452 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 RPS25P62851 125 aaKnown RBP19.88■□□□□ 0.77
CLN6-224ENST00000638076 MXD1Q05195 221 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 PLK5Q496M5 336 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 SLC35F1Q5T1Q4 408 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 C22orf42Q6IC83 251 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 NPSR1Q6W5P4 371 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 TMPRSS11FQ6ZWK6 438 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 BMP8AQ7Z5Y6 402 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 ZNF485Q8NCK3 441 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 RCBTB1Q8NDN9 531 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 UFD1Q92890 307 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 SPACA7Q96KW9 195 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 CEP19Q96LK0 163 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 TPK1Q9H3S4 243 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 SMURF1Q9HCE7 757 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 MEPEQ9NQ76 525 aaPredicted RBP19.88■□□□□ 0.77
CLN6-224ENST00000638076 TOR4AQ9NXH8 423 aa19.88■□□□□ 0.77
CLN6-224ENST00000638076 BLACEA4D250 179 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 BOLA2-SMG1P6H3BVE0 249 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 RFPL3O75679 317 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 SEPHS1P49903 392 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 PGDP52209 483 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 PLBD1Q6P4A8 553 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 GRAMD2AQ8IUY3 354 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 OR13C2Q8NGS9 318 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 ADAMTS18Q8TE60 1221 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 C1GALT1C1Q96EU7 318 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 ZNF285Q96NJ3 590 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 SIAEQ9HAT2 523 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 DNAJB12Q9NXW2 375 aaKnown RBP19.87■□□□□ 0.77
CLN6-224ENST00000638076 TMEM5Q9Y2B1 443 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 SF3B6Q9Y3B4 125 aaKnown RBP19.87■□□□□ 0.77
CLN6-224ENST00000638076 TMEM184BQ9Y519 407 aaPredicted RBP19.87■□□□□ 0.77
CLN6-224ENST00000638076 A0A1B0GWA3 101 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 AQP9O43315 295 aa19.87■□□□□ 0.77
CLN6-224ENST00000638076 CHP2O43745 196 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms