RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 GPR143P51810 404 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 SMN1Q16637 294 aaKnown RBP19.74■□□□□ 0.75
SPAST-204ENST00000621856 FAM199XQ6PEV8 388 aaPredicted RBP19.74■□□□□ 0.75
SPAST-204ENST00000621856 CPEB2Q7Z5Q1 589 aaKnown RBP19.74■□□□□ 0.75
SPAST-204ENST00000621856 SLC34A3Q8N130 599 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 GATSQ8NAP1 163 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 RHOXF1Q8NHV9 184 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 HSPBAP1Q96EW2 488 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 LRFN5Q96NI6 719 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 LPAR4Q99677 370 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 MESP1Q9BRJ9 268 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 VCX3AQ9NNX9 186 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 RPS6KB2Q9UBS0 482 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 LOXL2Q9Y4K0 774 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 SNX5Q9Y5X3 404 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 KIF26BQ2KJY2 2108 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 WDFY4Q6ZS81 3184 aa19.74■□□□□ 0.75
SPAST-204ENST00000621856 A0A1B0GWA3 101 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 M0R129 80 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 OR6B1O95007 311 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 CYC1P08574 325 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 LCN1P31025 176 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 GPR4P46093 362 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 E2F1Q01094 437 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 SLX4IPQ5VYV7 408 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 PTCHD4Q6ZW05 846 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 ZNF440Q8IYI8 595 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 CADM2Q8N3J6 435 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 SUMF1Q8NBK3 374 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 NFAM1Q8NET5 270 aaPredicted RBP19.73■□□□□ 0.75
SPAST-204ENST00000621856 TMEM239Q8WW34 195 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 OMA1Q96E52 524 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 WDR54Q9H977 334 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 FRYLO94915 3013 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 MPZL2O60487 215 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 CBFA2T3O75081 653 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 RFPL3O75679 317 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 CSNK2BP67870 215 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 RNF4P78317 190 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 PIGFQ07326 219 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 CASP12Q6UXS9 341 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 HSDL2Q6YN16 418 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 WDR88Q6ZMY6 472 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 AMER2Q8N7J2 671 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 ZNF441Q8N8Z8 693 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 ZNF540Q8NDQ6 660 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 TEX47Q8TBZ9 253 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 PHOSPHO1Q8TCT1 267 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 VMP1Q96GC9 406 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 NODALQ96S42 347 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 CDC6Q99741 560 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 SEMA4CQ9C0C4 833 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 CCDC90BQ9GZT6 254 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 DSN1Q9H410 356 aa19.73■□□□□ 0.75
SPAST-204ENST00000621856 PAK1IP1Q9NWT1 392 aaPredicted RBP19.73■□□□□ 0.75
SPAST-204ENST00000621856 MYO15AQ9UKN7 3530 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 A0A0B4J2E0 115 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 A0A1B0GX12 115 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 GTPBP1O00178 669 aaKnown RBP19.72■□□□□ 0.75
SPAST-204ENST00000621856 CHP2O43745 196 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 TSPAN2O60636 221 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 ADAM11O75078 769 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 ICOSLGO75144 302 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 UBL4AP11441 157 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 TBXA2RP21731 343 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 FPR3P25089 353 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 STAT5AP42229 794 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 NEDD8Q15843 81 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 DCAF12Q5T6F0 453 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 C12orf73Q69YU5 71 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 TMEM205Q6UW68 189 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 RASSF6Q6ZTQ3 369 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 KIF18BQ86Y91 864 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 CCDC103Q8IW40 242 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 RNF113BQ8IZP6 322 aaKnown RBP19.72■□□□□ 0.75
SPAST-204ENST00000621856 IQCF1Q8N6M8 205 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 GALNT6Q8NCL4 622 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 C17orf47Q8NEP4 570 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 TMIGD2Q96BF3 282 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 C8orf44Q96CB5 159 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 LIN28AQ9H9Z2 209 aaKnown RBP19.72■□□□□ 0.75
SPAST-204ENST00000621856 SELENONQ9NZV5 590 aa19.72■□□□□ 0.75
SPAST-204ENST00000621856 ZNF223Q9UK11 482 aaPredicted RBP19.72■□□□□ 0.75
SPAST-204ENST00000621856 TRBV11-1A0A0K0K1C0 115 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 CCDC160A6NGH7 325 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 C4orf47A7E2U8 309 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 TMX2-CTNND1H3BSU7 103 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 GABRB1P18505 474 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 ABCD3P28288 659 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 ETV5P41161 510 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 RAB15P59190 212 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 INSM1Q01101 510 aaPredicted RBP19.71■□□□□ 0.75
SPAST-204ENST00000621856 TEKQ02763 1124 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 GINS1Q14691 196 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 FNDC7Q5VTL7 733 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 FAM198BQ6UWH4 519 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 GPR141Q7Z602 305 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 SLCO6A1Q86UG4 719 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 SPARTQ8N0X7 666 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 LSMEM1Q8N8F7 131 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms