RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CCNJQ5T5M9 372 aa20.75■□□□□ 0.91
MMP28-203ENST00000612672 C11orf71Q6IPW1 123 aa20.75■□□□□ 0.91
MMP28-203ENST00000612672 BHLHA15Q7RTS1 189 aaPredicted RBP20.75■□□□□ 0.91
MMP28-203ENST00000612672 ZNF572Q7Z3I7 529 aaPredicted RBP20.75■□□□□ 0.91
MMP28-203ENST00000612672 RELL1Q8IUW5 271 aa20.75■□□□□ 0.91
MMP28-203ENST00000612672 SLC16A11Q8NCK7 471 aa20.75■□□□□ 0.91
MMP28-203ENST00000612672 CXorf36Q9H7Y0 433 aa20.75■□□□□ 0.91
MMP28-203ENST00000612672 C3orf14Q9HBI5 128 aa20.75■□□□□ 0.91
MMP28-203ENST00000612672 NFU1Q9UMS0 254 aa20.75■□□□□ 0.91
MMP28-203ENST00000612672 FAM234BA2RU67 622 aa20.74■□□□□ 0.91
MMP28-203ENST00000612672 IFI6P09912 130 aa20.74■□□□□ 0.91
MMP28-203ENST00000612672 PRPS2P11908 318 aa20.74■□□□□ 0.91
MMP28-203ENST00000612672 ME2P23368 584 aa20.74■□□□□ 0.91
MMP28-203ENST00000612672 GCAP28676 217 aa20.74■□□□□ 0.91
MMP28-203ENST00000612672 ZNF117Q03924 483 aa20.74■□□□□ 0.91
MMP28-203ENST00000612672 SPOCK1Q08629 439 aa20.74■□□□□ 0.91
MMP28-203ENST00000612672 P2RY6Q15077 328 aa20.74■□□□□ 0.91
MMP28-203ENST00000612672 FCRLAQ7L513 359 aa20.74■□□□□ 0.91
MMP28-203ENST00000612672 L3HYPDHQ96EM0 354 aa20.74■□□□□ 0.91
MMP28-203ENST00000612672 C16orf58Q96GQ5 468 aa20.74■□□□□ 0.91
MMP28-203ENST00000612672 ZNF180Q9UJW8 692 aa20.74■□□□□ 0.91
MMP28-203ENST00000612672 ENPP1P22413 925 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 PRKAG1P54619 331 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 PRKAA2P54646 552 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 PKNOX1P55347 436 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 ITGADQ13349 1161 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 TOMM34Q15785 309 aaPredicted RBP20.73■□□□□ 0.91
MMP28-203ENST00000612672 STK11Q15831 433 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 EXOSC6Q5RKV6 272 aaKnown RBP20.73■□□□□ 0.91
MMP28-203ENST00000612672 CBLN3Q6UW01 205 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 TDRPQ86YL5 185 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 ARIH2OSQ8N7S6 290 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 B4GALNT2Q8NHY0 566 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 CPNE4Q96A23 557 aaPredicted RBP20.73■□□□□ 0.91
MMP28-203ENST00000612672 CACNG6Q9BXT2 260 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 GRIP2Q9C0E4 1043 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 ALG2Q9H553 416 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 BARX1Q9HBU1 254 aaPredicted RBP20.73■□□□□ 0.91
MMP28-203ENST00000612672 NGBQ9NPG2 151 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 CDC42EP3Q9UKI2 254 aa20.73■□□□□ 0.91
MMP28-203ENST00000612672 NPIPA5A0A0B4J1W7 369 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 NPIPA7E9PJI5 369 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 NPIPA8P0DM63 369 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 ZNF16P17020 682 aaPredicted RBP20.72■□□□□ 0.91
MMP28-203ENST00000612672 TAC1P20366 129 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 ATP5F1P24539 256 aaPredicted RBP20.72■□□□□ 0.91
MMP28-203ENST00000612672 RNPS1Q15287 305 aaKnown RBP20.72■□□□□ 0.91
MMP28-203ENST00000612672 PDSS1Q5T2R2 415 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 GTF2IRD2BQ6EKJ0 949 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 NOXRED1Q6NXP6 359 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 GTF2IRD2Q86UP8 949 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 NUP43Q8NFH3 380 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 FBXO27Q8NI29 283 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 TNFRSF13CQ96RJ3 184 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 PSD2Q9BQI7 771 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 RHNO1Q9BSD3 238 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 MID1IP1Q9NPA3 183 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 CCL27Q9Y4X3 112 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 SNX8Q9Y5X2 465 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 PTGDR2Q9Y5Y4 395 aa20.72■□□□□ 0.91
MMP28-203ENST00000612672 TTC36A6NLP5 189 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 C9JVG2 144 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 ABCD4O14678 606 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 PDPK1O15530 556 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 YES1P07947 543 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 EFNA1P20827 205 aaPredicted RBP20.71■□□□□ 0.91
MMP28-203ENST00000612672 ECHS1P30084 290 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 NUDT6P53370 316 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 VLDLRP98155 873 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 KIAA0040Q15053 153 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 PPA1Q15181 289 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 NDUFAF6Q330K2 333 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 B3GLCTQ6Y288 498 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 ZNF525Q8N782 197 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 CDRT4Q8N9R6 151 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 ZNF775Q96BV0 537 aaPredicted RBP20.71■□□□□ 0.91
MMP28-203ENST00000612672 MANSC1Q9H8J5 431 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 NTMQ9P121 344 aa20.71■□□□□ 0.91
MMP28-203ENST00000612672 A0A1W2PNR3 127 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 E7EQL1 145 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 NPIPB8E9PQR5 432 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 PRKD3O94806 890 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 SNRPAP09012 282 aaKnown RBP20.7■□□□□ 0.9
MMP28-203ENST00000612672 PABPC4LP0CB38 370 aaKnown RBP20.7■□□□□ 0.9
MMP28-203ENST00000612672 IGHV1-2P23083 117 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 ELK4P28324 431 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 OR3A2P47893 321 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 LOXL1Q08397 574 aaPredicted RBP20.7■□□□□ 0.9
MMP28-203ENST00000612672 TMEM176BQ3YBM2 270 aaPredicted RBP20.7■□□□□ 0.9
MMP28-203ENST00000612672 C8orf74Q6P047 294 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 Q6ZT83 130 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 IKBIPQ70UQ0 350 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 SZRD1Q7Z422 152 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 LSRQ86X29 649 aaPredicted RBP20.7■□□□□ 0.9
MMP28-203ENST00000612672 C17orf53Q8N3J3 647 aaPredicted RBP20.7■□□□□ 0.9
MMP28-203ENST00000612672 ATP6V1C2Q8NEY4 427 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 ZNF300Q96RE9 604 aaPredicted RBP20.7■□□□□ 0.9
MMP28-203ENST00000612672 C19orf24Q9BVV8 132 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 UBQLN4Q9NRR5 601 aa20.7■□□□□ 0.9
MMP28-203ENST00000612672 TENM1Q9UKZ4 2725 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms