RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 TNIP2Q8NFZ5 429 aa23.52■■□□□ 1.36
VEGFA-226ENST00000611736 LILRB4Q8NHJ6 448 aa23.52■■□□□ 1.36
VEGFA-226ENST00000611736 ZPLD1Q8TCW7 415 aa23.52■■□□□ 1.36
VEGFA-226ENST00000611736 SMPDL3BQ92485 455 aa23.52■■□□□ 1.36
VEGFA-226ENST00000611736 UCK2Q9BZX2 261 aa23.52■■□□□ 1.36
VEGFA-226ENST00000611736 TPT1P8Q9HAU6 139 aa23.52■■□□□ 1.36
VEGFA-226ENST00000611736 NOTCH2Q04721 2471 aa23.52■■□□□ 1.36
VEGFA-226ENST00000611736 NKX2-6A6NCS4 301 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 SERINC4A6NH21 518 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 UGT2B17O75795 530 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 TOXO94900 526 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 H6PDO95479 791 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 NUDT14O95848 222 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 PEPDP12955 493 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 CD1EP15812 388 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 TXNL4AP83876 142 aaKnown RBP23.51■■□□□ 1.35
VEGFA-226ENST00000611736 SF3A3Q12874 501 aaKnown RBP eCLIP23.51■■□□□ 1.359e-12■■■■■ 32
VEGFA-226ENST00000611736 SYPL1Q16563 259 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 TMEM44Q2T9K0 475 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 PLPPR5Q32ZL2 321 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 PLXDC2Q6UX71 529 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 FRRS1Q6ZNA5 592 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 HMGN2P46Q86SG4 172 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 TMCO5AQ8N6Q1 288 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 ANKFN1Q8N957 763 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 NPAS1Q99742 590 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 TMEM120AQ9BXJ8 343 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 PAIP1Q9H074 479 aaKnown RBP23.51■■□□□ 1.35
VEGFA-226ENST00000611736 POLE3Q9NRF9 147 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 TRIM33Q9UPN9 1127 aa23.51■■□□□ 1.35
VEGFA-226ENST00000611736 CD8B2A6NJW9 211 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 CLCA1A8K7I4 914 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 C19orf84I3L1E1 186 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 LINC01387J3KSC0 135 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 SEC14L5O43304 696 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 TROVE2P10155 538 aaKnown RBP eCLIP23.5■■□□□ 1.353e-17■■■□□ 18.6
VEGFA-226ENST00000611736 UBL4AP11441 157 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 CAPN3P20807 821 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 CRATP43155 626 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 IRX1P78414 480 aaPredicted RBP23.5■■□□□ 1.35
VEGFA-226ENST00000611736 CHRNEQ04844 493 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 MAPK14Q16539 360 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 BCL2A1Q16548 175 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 ZNF619Q8N2I2 560 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 NAXEQ8NCW5 288 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 RABEP2Q9H5N1 569 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 CALHM2Q9HA72 323 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 CHST11Q9NPF2 352 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 LIPT1Q9Y234 373 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 PCDHB14Q9Y5E9 798 aa23.5■■□□□ 1.35
VEGFA-226ENST00000611736 H0YC42 278 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 ZNF264O43296 627 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 CYP7B1O75881 506 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 IL2RAP01589 272 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 CHRM4P08173 479 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 GUSBP08236 651 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 NR2F1P10589 423 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 ETFAP13804 333 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 ZNF17P17021 662 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 TIMP3P35625 211 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 P2RX1P51575 399 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 CCR4P51679 360 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 MVDP53602 400 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 TPD52P55327 224 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-226ENST00000611736 LIX1LQ8IVB5 337 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 GTPBP8Q8N3Z3 284 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-226ENST00000611736 MEIOBQ8N635 442 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 ZBTB8AQ96BR9 441 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 ZG16BQ96DA0 208 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 RNF145Q96MT1 663 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 TRNT1Q96Q11 434 aaKnown RBP23.49■■□□□ 1.35
VEGFA-226ENST00000611736 SAP130Q9H0E3 1048 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 ZNF385DQ9H6B1 395 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 ICAM5Q9UMF0 924 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 CACNA1DQ01668 2161 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 MAST4O15021 2626 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 ITPR2Q14571 2701 aa23.49■■□□□ 1.35
VEGFA-226ENST00000611736 MED12LQ86YW9 2145 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 A0A096LPI6 279 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 HSPB2A8KAH6 182 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 CEACAM8P31997 349 aaPredicted RBP23.48■■□□□ 1.35
VEGFA-226ENST00000611736 SUCLG1P53597 346 aaKnown RBP23.48■■□□□ 1.35
VEGFA-226ENST00000611736 CLDN20P56880 219 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 HSPB2Q16082 182 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 PAGE3Q5JUK9 113 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 CHMP1BQ7LBR1 199 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 C9orf106Q8NAJ2 232 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 QRSL1Q9H0R6 528 aaKnown RBP23.48■■□□□ 1.35
VEGFA-226ENST00000611736 KCNJ16Q9NPI9 418 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 SLC52A3Q9NQ40 469 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 TMEM45AQ9NWC5 275 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 L3MBTL1Q9Y468 752 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 AP4B1Q9Y6B7 739 aa23.48■■□□□ 1.35
VEGFA-226ENST00000611736 MBD3L4A6NDZ8 208 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-226ENST00000611736 MBD3L3A6NE82 208 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-226ENST00000611736 MBD3L5A6NJ08 208 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-226ENST00000611736 EIF4E2O60573 245 aaKnown RBP23.47■■□□□ 1.35
VEGFA-226ENST00000611736 CSTAP01040 98 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 LINGO3P0C6S8 592 aa23.47■■□□□ 1.35
VEGFA-226ENST00000611736 MAGEA8P43361 318 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms