RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 RASGEF1BQ0VAM2 473 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 CUL3Q13618 768 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 E2F2Q14209 437 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 ERCC6LQ2NKX8 1250 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 GRAMD1BQ3KR37 738 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 ZNF628Q5EBL2 1059 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 ARL13AQ5H913 290 aaPredicted RBP8.07□□□□□ -1.12
CTCFL-220ENST00000608858 FAM219BQ5XKK7 198 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 ZC3HC1Q86WB0 502 aaKnown RBP8.07□□□□□ -1.12
CTCFL-220ENST00000608858 GTPBP8Q8N3Z3 284 aaPredicted RBP8.07□□□□□ -1.12
CTCFL-220ENST00000608858 NAT8LQ8N9F0 302 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 WDR31Q8NA23 367 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 UBASH3BQ8TF42 649 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 WDR60Q8WVS4 1066 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 ZNF681Q96N22 645 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 CDK15Q96Q40 435 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 DESI2Q9BSY9 194 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 KRTAP17-1Q9BYP8 105 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 DERL2Q9GZP9 239 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 RAB1BQ9H0U4 201 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 MYOZ1Q9NP98 299 aaPredicted RBP8.07□□□□□ -1.12
CTCFL-220ENST00000608858 TIGARQ9NQ88 270 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 MED17Q9NVC6 651 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 RNF14Q9UBS8 474 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 PSME2Q9UL46 239 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 PCDHGA11Q9Y5H2 935 aa8.07□□□□□ -1.12
CTCFL-220ENST00000608858 GXYLT2A0PJZ3 443 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 C1orf226A1L170 272 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 SUPT3HB4E1H0 165 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 UBXN8O00124 270 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 SUPT3HO75486 399 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 ESRRBO95718 433 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 MSMBP08118 114 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 DDX5P17844 614 aaKnown RBP8.06□□□□□ -1.12
CTCFL-220ENST00000608858 MDKP21741 143 aaPredicted RBP8.06□□□□□ -1.12
CTCFL-220ENST00000608858 PCGF2P35227 344 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 ARL1P40616 181 aaPredicted RBP8.06□□□□□ -1.12
CTCFL-220ENST00000608858 IDH3GP51553 393 aaPredicted RBP8.06□□□□□ -1.12
CTCFL-220ENST00000608858 SLC12A2P55011 1212 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 PHEXP78562 749 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 ZNF155Q12901 538 aaPredicted RBP8.06□□□□□ -1.12
CTCFL-220ENST00000608858 DECR1Q16698 335 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 PLPPR5Q32ZL2 321 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 LRRC70Q7Z2Q7 622 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 TBC1D1Q86TI0 1168 aaPredicted RBP8.06□□□□□ -1.12
CTCFL-220ENST00000608858 SIGLECL1Q8N7X8 197 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 ZNF511Q8NB15 262 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 OR7G2Q8NG99 324 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 CLDND2Q8NHS1 167 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 RNF217Q8TC41 542 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 ZNF75CPQ92670 426 aaPredicted RBP8.06□□□□□ -1.12
CTCFL-220ENST00000608858 CPNE4Q96A23 557 aaPredicted RBP8.06□□□□□ -1.12
CTCFL-220ENST00000608858 EXOSC8Q96B26 276 aaKnown RBP8.06□□□□□ -1.12
CTCFL-220ENST00000608858 DNAJA3Q96EY1 480 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 PSD2Q9BQI7 771 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 ALG9Q9H6U8 611 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 FAM120CQ9NX05 1096 aaKnown RBP8.06□□□□□ -1.12
CTCFL-220ENST00000608858 UTS2RQ9UKP6 389 aa8.06□□□□□ -1.12
CTCFL-220ENST00000608858 ZNF195O14628 629 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 BCAS2O75934 225 aaPredicted RBP8.05□□□□□ -1.12
CTCFL-220ENST00000608858 IGKV1D-16P01601 117 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 CDH2P19022 906 aaPredicted RBP8.05□□□□□ -1.12
CTCFL-220ENST00000608858 COX5AP20674 150 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 COL8A2P25067 703 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 NTF4P34130 210 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 ELK3P41970 407 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 ZNF41P51814 821 aaPredicted RBP8.05□□□□□ -1.12
CTCFL-220ENST00000608858 ARFIP1P53367 373 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 SLC25A3Q00325 362 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 IL1RL1Q01638 556 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 SLC18A2Q05940 514 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 RIN1Q13671 783 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 GABRA6Q16445 453 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 LIPJQ5W064 366 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 LEG1Q6P5S2 330 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 GALNT7Q86SF2 657 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 TRABD2AQ86V40 505 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 ANKMY2Q8IV38 441 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 ZNF786Q8N393 782 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 PDPRQ8NCN5 879 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 OR52E4Q8NGH9 312 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 OR4C3Q8NH37 302 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 WDR20Q8TBZ3 569 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 MUS81Q96NY9 551 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 SERPINI1Q99574 410 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 SAP130Q9H0E3 1048 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 TPK1Q9H3S4 243 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 GUCA1BQ9UMX6 200 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 ABCG2Q9UNQ0 655 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 CHMP2BQ9UQN3 213 aa8.05□□□□□ -1.12
CTCFL-220ENST00000608858 A0A087WZY1 265 aa8.04□□□□□ -1.12
CTCFL-220ENST00000608858 POM121CA8CG34 1229 aa8.04□□□□□ -1.12
CTCFL-220ENST00000608858 B9A039 149 aa8.04□□□□□ -1.12
CTCFL-220ENST00000608858 H0YIV9 168 aa8.04□□□□□ -1.12
CTCFL-220ENST00000608858 FOXE1O00358 373 aaPredicted RBP8.04□□□□□ -1.12
CTCFL-220ENST00000608858 SKAP2O75563 359 aaPredicted RBP8.04□□□□□ -1.12
CTCFL-220ENST00000608858 PNPP00491 289 aa8.04□□□□□ -1.12
CTCFL-220ENST00000608858 ADRA2AP08913 450 aa8.04□□□□□ -1.12
CTCFL-220ENST00000608858 TCN1P20061 433 aaPredicted RBP8.04□□□□□ -1.12
CTCFL-220ENST00000608858 GABRA3P34903 492 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms