RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ZNF117Q03924 483 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 CBFBQ13951 182 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 SCARB2Q14108 478 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 LARS2Q15031 903 aaKnown RBP12.95□□□□□ -0.34
CTSA-219ENST00000607841 MAPK11Q15759 364 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 LIN52Q52LA3 116 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 NHSL2Q5HYW2 709 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 WLSQ5T9L3 541 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 KRT73Q86Y46 540 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 SLC30A8Q8IWU4 369 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 TMCO5AQ8N6Q1 288 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 C11orf65Q8NCR3 313 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 OR52P1PQ8NH57 321 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 OR10A6Q8NH74 314 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 NFKBIDQ8NI38 313 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 WDR60Q8WVS4 1066 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 ZBTB8AQ96BR9 441 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 SFXN2Q96NB2 322 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 PIGQQ9BRB3 760 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 SLC39A3Q9BRY0 314 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 SPATA5L1Q9BVQ7 753 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 LAT2Q9GZY6 243 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 QRSL1Q9H0R6 528 aaKnown RBP12.95□□□□□ -0.34
CTSA-219ENST00000607841 ANGPT4Q9Y264 503 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 IFT52Q9Y366 437 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 L3MBTL1Q9Y468 752 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 HRH3Q9Y5N1 445 aa12.95□□□□□ -0.34
CTSA-219ENST00000607841 NUP214P35658 2090 aaPredicted RBP12.95□□□□□ -0.34
CTSA-219ENST00000607841 SERPINB7O75635 380 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 CYP7B1O75881 506 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 NUDT14O95848 222 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 THBS1P07996 1170 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 UBTFL6P0CB48 400 aaPredicted RBP12.94□□□□□ -0.34
CTSA-219ENST00000607841 NID1P14543 1247 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 ETS2P15036 469 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 RPS4Y1P22090 263 aaKnown RBP12.94□□□□□ -0.34
CTSA-219ENST00000607841 CHMP24386 653 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 PGM1P36871 562 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 NUDT2P50583 147 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 SELPLGQ14242 412 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 ADRM1Q16186 407 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 RAET1LQ5VY80 246 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 FAM91A1Q658Y4 838 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 CBLN3Q6UW01 205 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 ENPP6Q6UWR7 440 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 HACD2Q6Y1H2 254 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 NET1Q7Z628 596 aaPredicted RBP12.94□□□□□ -0.34
CTSA-219ENST00000607841 FGD2Q7Z6J4 655 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 CHERPQ8IWX8 916 aaKnown RBP12.94□□□□□ -0.34
CTSA-219ENST00000607841 PM20D2Q8IYS1 436 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 C10orf111Q8N326 155 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 HIPK4Q8NE63 616 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 OR5W2Q8NH69 310 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 ABTB1Q969K4 478 aaPredicted RBP12.94□□□□□ -0.34
CTSA-219ENST00000607841 ZNF607Q96SK3 696 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 TRIM8Q9BZR9 551 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 EXOSC3Q9NQT5 275 aaKnown RBP12.94□□□□□ -0.34
CTSA-219ENST00000607841 SPRR3Q9UBC9 169 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 STOML1Q9UBI4 398 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 ICAM5Q9UMF0 924 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 RPH3AQ9Y2J0 694 aaPredicted RBP12.94□□□□□ -0.34
CTSA-219ENST00000607841 SLC6A5Q9Y345 797 aa12.94□□□□□ -0.34
CTSA-219ENST00000607841 GCN1Q92616 2671 aaKnown RBP12.93□□□□□ -0.34
CTSA-219ENST00000607841 EXPH5Q8NEV8 1989 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 CENPVL1A0A0U1RR11 272 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 FIGNL2A6NMB9 653 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 B4DXG7 233 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 UQCRBP14927 111 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 ZNF17P17021 662 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 BMP7P18075 431 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 EIF1P41567 113 aaKnown RBP12.93□□□□□ -0.34
CTSA-219ENST00000607841 CA7P43166 264 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 SLC6A8P48029 635 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 RNF144AP50876 292 aaPredicted RBP12.93□□□□□ -0.34
CTSA-219ENST00000607841 CCR4P51679 360 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 MNAT1P51948 309 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 GFRA1P56159 465 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 SKP2Q13309 424 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 KRT72Q14CN4 511 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 SF3B4Q15427 424 aaKnown RBP eCLIP12.93□□□□□ -0.345e-11■■■■■ 36.9
CTSA-219ENST00000607841 GXYLT1Q4G148 440 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 RABL3Q5HYI8 236 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 ZNF311Q5JNZ3 666 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 RPS26P11Q5JNZ5 115 aaPredicted RBP12.93□□□□□ -0.34
CTSA-219ENST00000607841 INTS11Q5TA45 600 aaKnown RBP12.93□□□□□ -0.34
CTSA-219ENST00000607841 VASNQ6EMK4 673 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 ERICH5Q6P6B1 374 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 ARSKQ6UWY0 536 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 HMGN2P46Q86SG4 172 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 CD163Q86VB7 1156 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 RELTQ969Z4 430 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 ARSGQ96EG1 525 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 REXO5Q96IC2 774 aaKnown RBP12.93□□□□□ -0.34
CTSA-219ENST00000607841 TIMP4Q99727 224 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 GPATCH1Q9BRR8 931 aaKnown RBP12.93□□□□□ -0.34
CTSA-219ENST00000607841 TP63Q9H3D4 680 aaPredicted RBP12.93□□□□□ -0.34
CTSA-219ENST00000607841 MED17Q9NVC6 651 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 TAGLN3Q9UI15 199 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 PRDM4Q9UKN5 801 aa12.93□□□□□ -0.34
CTSA-219ENST00000607841 VDAC3Q9Y277 283 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms