RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 HMGN2P46Q86SG4 172 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 TMCO5AQ8N6Q1 288 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 RELL2Q8NC24 303 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 CHDHQ8NE62 594 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 MBD3L2Q8NHZ7 208 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 MIPOL1Q8TD10 442 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 VPS33AQ96AX1 596 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 INTS12Q96CB8 462 aaKnown RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 MAGEB18Q96M61 343 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 HHATLQ9HCP6 504 aa13.01□□□□□ -0.33
TUBE1-208ENST00000604743 SDR39U1Q9NRG7 319 aaPredicted RBP13.01□□□□□ -0.33
TUBE1-208ENST00000604743 DCHS2Q6V1P9 2916 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 TEX15Q9BXT5 2789 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 ABCA12Q86UK0 2595 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 MPDZO75970 2070 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 A0A087WZY1 265 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 LINC01387J3KSC0 135 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 TGM6O95932 706 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 AGR2O95994 175 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 CTSSP25774 331 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 UQCRC1P31930 480 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 CCR4P51679 360 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 CLDN15P56746 228 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 CLDN20P56880 219 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 EEFSECP57772 596 aaKnown RBP13□□□□□ -0.33
TUBE1-208ENST00000604743 HPCAP84074 193 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 LRRC74AQ0VAA2 488 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 FOXF2Q12947 444 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 PLPPR5Q32ZL2 321 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 HEPHL1Q6MZM0 1159 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 GCNT2Q8N0V5 402 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 WNT2BQ93097 391 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 ZBTB8AQ96BR9 441 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 ROPN1LQ96C74 230 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 TM9SF2Q99805 663 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 SPOCK3Q9BQ16 436 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 PINK1Q9BXM7 581 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 ENKD1Q9H0I2 346 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 TMEM185BQ9H7F4 350 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 RMND5AQ9H871 391 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 CLCF1Q9UBD9 225 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 ZNF629Q9UEG4 869 aaPredicted RBP13□□□□□ -0.33
TUBE1-208ENST00000604743 KCNE5Q9UJ90 142 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 WDR45Q9Y484 360 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 AP4B1Q9Y6B7 739 aa13□□□□□ -0.33
TUBE1-208ENST00000604743 CENPVL1A0A0U1RR11 272 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 SERINC4A6NH21 518 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 SLC22A20A6NK97 555 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 EEF1E1-BLOC1S5C9J1V9 151 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 NPIPB9F8W1W9 429 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 HMGN4O00479 90 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 EIF1AYO14602 144 aaKnown RBP12.99□□□□□ -0.33
TUBE1-208ENST00000604743 EEF1E1O43324 174 aaKnown RBP12.99□□□□□ -0.33
TUBE1-208ENST00000604743 RCBTB2O95199 551 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 P2RX1P51575 399 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 RPS3AP61247 264 aaKnown RBP12.99□□□□□ -0.33
TUBE1-208ENST00000604743 FUT5Q11128 374 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 SYPL1Q16563 259 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 SGCBQ16585 318 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 TMEM44Q2T9K0 475 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 GTDC1Q4AE62 458 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 COX20Q5RI15 118 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 C6orf10Q5SRN2 563 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 TYW3Q6IPR3 259 aaKnown RBP12.99□□□□□ -0.33
TUBE1-208ENST00000604743 POMZP3Q6PJE2 187 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 GDF7Q7Z4P5 450 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 ADGRE4PQ86SQ3 457 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 ZNF295-AS1Q8N0V1 137 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 GTPBP8Q8N3Z3 284 aaPredicted RBP12.99□□□□□ -0.33
TUBE1-208ENST00000604743 POC1BQ8TC44 478 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 FIG4Q92562 907 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 ARSGQ96EG1 525 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 ZNF845Q96IR2 970 aaPredicted RBP12.99□□□□□ -0.33
TUBE1-208ENST00000604743 ITCHQ96J02 903 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 RNF145Q96MT1 663 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 CCDC28BQ9BUN5 200 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 TRIM8Q9BZR9 551 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 NMUR2Q9GZQ4 415 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 ZNF350Q9GZX5 532 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 SLC6A13Q9NSD5 602 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 ZNF446Q9NWS9 450 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 STOML1Q9UBI4 398 aa12.99□□□□□ -0.33
TUBE1-208ENST00000604743 APCP25054 2843 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 FAM234BA2RU67 622 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 PRAMEF27A3QJZ7 478 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 ZNF264O43296 627 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 UGT2B17O75795 530 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 KRT75O95678 551 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 CSTAP01040 98 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 LINGO3P0C6S8 592 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 UBL4AP11441 157 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 ZNF17P17021 662 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 IL11P20809 199 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 OPRM1P35372 400 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 EIF1AXP47813 144 aaKnown RBP12.98□□□□□ -0.33
TUBE1-208ENST00000604743 ASCL1P50553 236 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 ANXA11P50995 505 aaKnown RBP12.98□□□□□ -0.33
TUBE1-208ENST00000604743 DLX5P56178 289 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 CHRNEQ04844 493 aa12.98□□□□□ -0.33
TUBE1-208ENST00000604743 FOXF1Q12946 379 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms