RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 PIP5K1BO14986 540 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 EFNA2O43921 213 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 CHEK2O96017 543 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 HMGN2P05204 90 aaKnown RBP9.39□□□□□ -0.91
LSM4-205ENST00000597776 TUBBP07437 444 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 NID1P14543 1247 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 HPCAL1P37235 193 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 SERPINB4P48594 390 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 NR1H2P55055 460 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 CARD18P57730 90 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 POU6F2P78424 691 aaPredicted RBP9.39□□□□□ -0.91
LSM4-205ENST00000597776 ZNF117Q03924 483 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 ZNF239Q16600 458 aaKnown RBP9.39□□□□□ -0.91
LSM4-205ENST00000597776 NDUFAF6Q330K2 333 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 CBLN3Q6UW01 205 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 RNF165Q6ZSG1 346 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 BEND4Q6ZU67 534 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 NUFIP2Q7Z417 695 aaKnown RBP9.39□□□□□ -0.91
LSM4-205ENST00000597776 STK32CQ86UX6 486 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 TRABD2AQ86V40 505 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 TDRPQ86YL5 185 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 ZNF619Q8N2I2 560 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 OR7A2PQ8NGA2 310 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 RAB3IL1Q8TBN0 382 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 PHOSPHO1Q8TCT1 267 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 AGR3Q8TD06 166 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 TMEM171Q8WVE6 324 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 TWIST2Q8WVJ9 160 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 AKAP1Q92667 903 aaKnown RBP eCLIP9.39□□□□□ -0.91
LSM4-205ENST00000597776 S100PBPQ96BU1 408 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 TMEM204Q9BSN7 226 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 MECRQ9BV79 373 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 BTBD2Q9BX70 525 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 GLRX2Q9NS18 164 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 SNX8Q9Y5X2 465 aa9.39□□□□□ -0.91
LSM4-205ENST00000597776 A0A1W2PQD3 144 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 SCAMP2O15127 329 aaKnown RBP9.38□□□□□ -0.91
LSM4-205ENST00000597776 TRIM13O60858 407 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 NUDT14O95848 222 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 LAMP1P11279 417 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 PSMB1P20618 241 aaKnown RBP9.38□□□□□ -0.91
LSM4-205ENST00000597776 ALDH3A1P30838 453 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 LCN1P31025 176 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 ASMTP46597 345 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 ATP5J2P56134 94 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 TOMM34Q15785 309 aaPredicted RBP9.38□□□□□ -0.91
LSM4-205ENST00000597776 UGT3A2Q3SY77 523 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 ARL13AQ5H913 290 aaPredicted RBP9.38□□□□□ -0.91
LSM4-205ENST00000597776 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.38□□□□□ -0.91
LSM4-205ENST00000597776 PDSS1Q5T2R2 415 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 CDC73Q6P1J9 531 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 ZCCHC12Q6PEW1 402 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 LRIG3Q6UXM1 1119 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 TFAP2EQ6VUC0 442 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 ATG4DQ86TL0 474 aaPredicted RBP9.38□□□□□ -0.91
LSM4-205ENST00000597776 MISPQ8IVT2 679 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 CNPY4Q8N129 248 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 ATP6V1C2Q8NEY4 427 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 FBXO27Q8NI29 283 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 RNF128Q8TEB7 428 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 ZNF524Q96C55 264 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 MTERF3Q96E29 417 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 MDFIQ99750 246 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 TRMOQ9BU70 441 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 C1orf50Q9BV19 199 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 PIGUQ9H490 435 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 CXorf56Q9H5V9 222 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 HHATLQ9HCP6 504 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 DUSP22Q9NRW4 184 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 ZNF701Q9NV72 531 aaPredicted RBP9.38□□□□□ -0.91
LSM4-205ENST00000597776 ATP6V1HQ9UI12 483 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 CARD8Q9Y2G2 431 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 GPR52Q9Y2T5 361 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 TMED5Q9Y3A6 229 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 TRAF6Q9Y4K3 522 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 KCNE3Q9Y6H6 103 aa9.38□□□□□ -0.91
LSM4-205ENST00000597776 ANK3Q12955 4377 aaKnown RBP9.38□□□□□ -0.91
LSM4-205ENST00000597776 USF3Q68DE3 2245 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 PRR14LQ5THK1 2151 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 CSPG4Q6UVK1 2322 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 IGHV3-15A0A0B4J1V0 119 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 KIF2AO00139 706 aaPredicted RBP9.37□□□□□ -0.91
LSM4-205ENST00000597776 ZNF195O14628 629 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 PEX11AO75192 247 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 GCM2O75603 506 aaPredicted RBP9.37□□□□□ -0.91
LSM4-205ENST00000597776 C6orf47O95873 294 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 PAX1P15863 534 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 ATP6V1C1P21283 382 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 ELK4P28324 431 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 EIF1P41567 113 aaKnown RBP9.37□□□□□ -0.91
LSM4-205ENST00000597776 TP53BP2Q13625 1128 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 CAPRIN1Q14444 709 aaKnown RBP9.37□□□□□ -0.91
LSM4-205ENST00000597776 PTGR1Q14914 329 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 MLC1Q15049 377 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 TMEM176BQ3YBM2 270 aaPredicted RBP9.37□□□□□ -0.91
LSM4-205ENST00000597776 KLHL26Q53HC5 615 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 TMEM201Q5SNT2 666 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 DCST2Q5T1A1 773 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 ZCCHC23Q6ZST2 131 aa9.37□□□□□ -0.91
LSM4-205ENST00000597776 R3HCC1LQ7Z5L2 792 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms